RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YAP1801P38856 637 aa4.43□□□□□ -1.7
SEC4YFL005W MNN10P50108 393 aaKnown RBP4.43□□□□□ -1.7
SEC4YFL005W SUN4P53616 420 aa4.43□□□□□ -1.7
SEC4YFL005W PLB2Q03674 706 aa4.43□□□□□ -1.7
SEC4YFL005W YGR161W-CQ3E744 92 aa4.43□□□□□ -1.7
SEC4YFL005W GSY1P23337 708 aa4.42□□□□□ -1.7
SEC4YFL005W STE11P23561 717 aa4.42□□□□□ -1.7
SEC4YFL005W EMC3P36039 253 aa4.42□□□□□ -1.7
SEC4YFL005W ECM21P38167 1117 aaKnown RBP4.42□□□□□ -1.7
SEC4YFL005W DAM1P53267 343 aa4.42□□□□□ -1.7
SEC4YFL005W YGR283CP53336 341 aaPredicted RBP4.42□□□□□ -1.7
SEC4YFL005W SFB2P53953 876 aa4.42□□□□□ -1.7
SEC4YFL005W DNM1P54861 757 aa4.42□□□□□ -1.7
SEC4YFL005W RSM24Q03976 319 aa4.42□□□□□ -1.7
SEC4YFL005W YPR196WQ06595 470 aa4.42□□□□□ -1.7
SEC4YFL005W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SEC4YFL005W GAL10P04397 699 aa4.41□□□□□ -1.7
SEC4YFL005W CDC20P26309 610 aa4.41□□□□□ -1.7
SEC4YFL005W PMI40P29952 429 aaKnown RBP4.41□□□□□ -1.7
SEC4YFL005W SPC29P33419 253 aa4.41□□□□□ -1.7
SEC4YFL005W YJR142WP47173 342 aa4.41□□□□□ -1.7
SEC4YFL005W NIT3P49954 291 aa4.41□□□□□ -1.7
SEC4YFL005W MCM6P53091 1017 aaKnown RBP4.41□□□□□ -1.7
SEC4YFL005W YGL081WP53156 320 aa4.41□□□□□ -1.7
SEC4YFL005W MSC2Q03455 724 aa4.41□□□□□ -1.7
SEC4YFL005W SIZ1Q04195 904 aa4.41□□□□□ -1.7
SEC4YFL005W RXT3Q07458 294 aa4.41□□□□□ -1.7
SEC4YFL005W ENV7Q12003 364 aa4.41□□□□□ -1.7
SEC4YFL005W NTO1Q12311 748 aa4.41□□□□□ -1.7
SEC4YFL005W RPL8AP17076 256 aaKnown RBP4.4□□□□□ -1.71
SEC4YFL005W SFP1P32432 683 aa4.4□□□□□ -1.71
SEC4YFL005W DSS1P39112 969 aa4.4□□□□□ -1.71
SEC4YFL005W GYP8P43570 497 aa4.4□□□□□ -1.71
SEC4YFL005W ATP25Q03153 612 aa4.4□□□□□ -1.71
SEC4YFL005W ACK1Q07622 623 aaPredicted RBP4.4□□□□□ -1.71
SEC4YFL005W MPH2P0CD99 609 aa4.39□□□□□ -1.71
SEC4YFL005W MEF1P25039 761 aa4.39□□□□□ -1.71
SEC4YFL005W VBA3P25594 458 aa4.39□□□□□ -1.71
SEC4YFL005W LST4P34239 828 aa4.39□□□□□ -1.71
SEC4YFL005W TFB2Q02939 513 aa4.39□□□□□ -1.71
SEC4YFL005W YDR514CQ04408 483 aa4.39□□□□□ -1.71
SEC4YFL005W RFA1P22336 621 aaKnown RBP4.38□□□□□ -1.71
SEC4YFL005W MTC2P34246 357 aa4.38□□□□□ -1.71
SEC4YFL005W AIM21P40563 679 aa4.38□□□□□ -1.71
SEC4YFL005W PBP1P53297 722 aaKnown RBP4.38□□□□□ -1.71
SEC4YFL005W YNL193WP53870 558 aa4.38□□□□□ -1.71
SEC4YFL005W REH1Q06709 432 aa4.38□□□□□ -1.71
SEC4YFL005W MET7Q08645 548 aa4.38□□□□□ -1.71
SEC4YFL005W ADR1P07248 1323 aa4.38□□□□□ -1.71
SEC4YFL005W CDC9P04819 755 aa4.37□□□□□ -1.71
SEC4YFL005W NOT3P06102 836 aaKnown RBP4.37□□□□□ -1.71
SEC4YFL005W HSF1P10961 833 aa4.37□□□□□ -1.71
SEC4YFL005W CRP1P38845 465 aaKnown RBP4.37□□□□□ -1.71
SEC4YFL005W GCV2P49095 1034 aa4.37□□□□□ -1.71
SEC4YFL005W GTF1P53260 183 aaPredicted RBP4.37□□□□□ -1.71
SEC4YFL005W NOG2P53742 486 aaKnown RBP4.37□□□□□ -1.71
SEC4YFL005W VPS30Q02948 557 aa4.37□□□□□ -1.71
SEC4YFL005W TMA10Q06177 86 aa4.37□□□□□ -1.71
SEC4YFL005W GPB1Q08886 897 aa4.37□□□□□ -1.71
SEC4YFL005W SRP101P32916 621 aa4.36□□□□□ -1.71
SEC4YFL005W STO1P34160 861 aaKnown RBP4.36□□□□□ -1.71
SEC4YFL005W YEL1P34225 687 aa4.36□□□□□ -1.71
SEC4YFL005W CHS7P38843 316 aa4.36□□□□□ -1.71
SEC4YFL005W ZRG8P40021 1076 aa4.36□□□□□ -1.71
SEC4YFL005W CAF16P43569 289 aa4.36□□□□□ -1.71
SEC4YFL005W TY4A-JP47023 414 aa4.36□□□□□ -1.71
SEC4YFL005W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SEC4YFL005W RAI1P53063 387 aaKnown RBP4.36□□□□□ -1.71
SEC4YFL005W YGR012WP53206 393 aa4.36□□□□□ -1.71
SEC4YFL005W YNR029CP53729 429 aaKnown RBP4.36□□□□□ -1.71
SEC4YFL005W RSC3Q06639 885 aa4.36□□□□□ -1.71
SEC4YFL005W CDA1Q06702 301 aa4.36□□□□□ -1.71
SEC4YFL005W SRD1P09007 221 aa4.35□□□□□ -1.71
SEC4YFL005W CDC6P09119 513 aa4.35□□□□□ -1.71
SEC4YFL005W ENA1P13587 1091 aa4.35□□□□□ -1.71
SEC4YFL005W DAL7P21826 554 aa4.35□□□□□ -1.71
SEC4YFL005W URA1P28272 314 aaPredicted RBP4.35□□□□□ -1.71
SEC4YFL005W STE13P33894 931 aa4.35□□□□□ -1.71
SEC4YFL005W UBP12P39538 1254 aa4.35□□□□□ -1.71
SEC4YFL005W ZDS1P50111 915 aaKnown RBP4.35□□□□□ -1.71
SEC4YFL005W PHO23P50947 330 aa4.35□□□□□ -1.71
SEC4YFL005W HDA1P53973 706 aa4.35□□□□□ -1.71
SEC4YFL005W ENA2Q01896 1091 aa4.35□□□□□ -1.71
SEC4YFL005W COG8Q04632 607 aa4.35□□□□□ -1.71
SEC4YFL005W YLR001CQ07895 862 aa4.35□□□□□ -1.71
SEC4YFL005W ENA5Q12691 1091 aa4.35□□□□□ -1.71
SEC4YFL005W RPS9AO13516 197 aaKnown RBP4.34□□□□□ -1.71
SEC4YFL005W PMA1P05030 918 aaKnown RBP4.34□□□□□ -1.71
SEC4YFL005W TSR4P25040 408 aa4.34□□□□□ -1.71
SEC4YFL005W CYS3P31373 394 aaKnown RBP4.34□□□□□ -1.71
SEC4YFL005W GRX4P32642 244 aa4.34□□□□□ -1.71
SEC4YFL005W MND2P40577 368 aa4.34□□□□□ -1.71
SEC4YFL005W CEP3P40969 608 aa4.34□□□□□ -1.71
SEC4YFL005W HLJ1P48353 224 aa4.34□□□□□ -1.71
SEC4YFL005W PSP2P50109 593 aaKnown RBP4.34□□□□□ -1.71
SEC4YFL005W TAD1P53065 400 aa4.34□□□□□ -1.71
SEC4YFL005W YKR011CQ02209 353 aa4.34□□□□□ -1.71
SEC4YFL005W PER1P25625 357 aa4.33□□□□□ -1.72
SEC4YFL005W DCG1P32460 244 aa4.33□□□□□ -1.72
SEC4YFL005W TYE7P33122 291 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms