RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W HXT8P40886 569 aa10.78□□□□□ -0.68
SNF1YDR477W NNF2P53253 936 aa10.78□□□□□ -0.68
SNF1YDR477W PXR1P53335 271 aaPredicted RBP10.78□□□□□ -0.68
SNF1YDR477W SHE9Q04172 456 aa10.78□□□□□ -0.68
SNF1YDR477W VIP1Q06685 1146 aaKnown RBP10.78□□□□□ -0.68
SNF1YDR477W KRE2P27809 442 aa10.77□□□□□ -0.69
SNF1YDR477W BLI1P35727 113 aa10.77□□□□□ -0.69
SNF1YDR477W HOS4P40480 1083 aa10.77□□□□□ -0.69
SNF1YDR477W INA22P40576 216 aa10.77□□□□□ -0.69
SNF1YDR477W YGR273CP53329 174 aa10.77□□□□□ -0.69
SNF1YDR477W TFC3P34111 1160 aa10.76□□□□□ -0.69
SNF1YDR477W TIF5P38431 405 aaKnown RBP10.76□□□□□ -0.69
SNF1YDR477W LAM6Q08001 693 aa10.76□□□□□ -0.69
SNF1YDR477W YMR085WP0CF18 432 aa10.76□□□□□ -0.69
SNF1YDR477W PEP5P12868 1029 aa10.76□□□□□ -0.69
SNF1YDR477W FRD1P32614 470 aaKnown RBP10.76□□□□□ -0.69
SNF1YDR477W YBR032WP38223 100 aa10.76□□□□□ -0.69
SNF1YDR477W MMS21P38632 267 aa10.76□□□□□ -0.69
SNF1YDR477W GAA1P39012 614 aa10.76□□□□□ -0.69
SNF1YDR477W FOL1P53848 824 aa10.76□□□□□ -0.69
SNF1YDR477W ATP25Q03153 612 aa10.76□□□□□ -0.69
SNF1YDR477W BDF2Q07442 638 aa10.76□□□□□ -0.69
SNF1YDR477W OCA6Q12454 224 aa10.76□□□□□ -0.69
SNF1YDR477W CAF20P12962 161 aaKnown RBP10.75□□□□□ -0.69
SNF1YDR477W PWP1P21304 576 aaKnown RBP10.75□□□□□ -0.69
SNF1YDR477W REC107P21651 314 aa10.75□□□□□ -0.69
SNF1YDR477W SAK1P38990 1142 aa10.75□□□□□ -0.69
SNF1YDR477W EMW1P42842 904 aaKnown RBP10.75□□□□□ -0.69
SNF1YDR477W YKU80Q04437 629 aa10.75□□□□□ -0.69
SNF1YDR477W GPN2Q08726 347 aaPredicted RBP10.75□□□□□ -0.69
SNF1YDR477W HIS2P38635 335 aa10.74□□□□□ -0.69
SNF1YDR477W SUM1P46676 1062 aa10.74□□□□□ -0.69
SNF1YDR477W ARI1P53111 347 aaKnown RBP10.74□□□□□ -0.69
SNF1YDR477W JJJ1P53863 590 aa10.74□□□□□ -0.69
SNF1YDR477W YLR297WQ05899 129 aa10.74□□□□□ -0.69
SNF1YDR477W KEL3Q08979 651 aaPredicted RBP10.74□□□□□ -0.69
SNF1YDR477W CLF1Q12309 687 aaPredicted RBP10.74□□□□□ -0.69
SNF1YDR477W NKP1Q12493 238 aa10.74□□□□□ -0.69
SNF1YDR477W PFK1P16861 987 aaKnown RBP10.74□□□□□ -0.69
SNF1YDR477W CHS3P29465 1165 aa10.74□□□□□ -0.69
SNF1YDR477W EFB1P32471 206 aaKnown RBP10.74□□□□□ -0.69
SNF1YDR477W SSE1P32589 693 aaKnown RBP10.74□□□□□ -0.69
SNF1YDR477W RRT2P38332 387 aa10.74□□□□□ -0.69
SNF1YDR477W JJJ2P46997 583 aa10.74□□□□□ -0.69
SNF1YDR477W MSN5P52918 1224 aa10.74□□□□□ -0.69
SNF1YDR477W ZIP2P53061 704 aa10.74□□□□□ -0.69
SNF1YDR477W MTG1Q03151 367 aaPredicted RBP10.74□□□□□ -0.69
SNF1YDR477W DIB1Q06819 143 aaPredicted RBP10.74□□□□□ -0.69
SNF1YDR477W MED1Q12321 566 aa10.74□□□□□ -0.69
SNF1YDR477W HIF1Q12373 385 aa10.74□□□□□ -0.69
SNF1YDR477W PUF4P25339 888 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
SNF1YDR477W ERP5P38819 212 aa10.73□□□□□ -0.69
SNF1YDR477W END3P39013 349 aa10.73□□□□□ -0.69
SNF1YDR477W GVP36P40531 326 aaKnown RBP10.73□□□□□ -0.69
SNF1YDR477W PGA2P53903 129 aa10.73□□□□□ -0.69
SNF1YDR477W BUL2Q03758 920 aaKnown RBP10.73□□□□□ -0.69
SNF1YDR477W SLP1Q12232 587 aa10.73□□□□□ -0.69
SNF1YDR477W ILV2P07342 687 aaKnown RBP10.72□□□□□ -0.69
SNF1YDR477W CAP1P28495 268 aaKnown RBP10.72□□□□□ -0.69
SNF1YDR477W CDC11P32458 415 aa10.72□□□□□ -0.69
SNF1YDR477W EUG1P32474 517 aa10.72□□□□□ -0.69
SNF1YDR477W NUP82P40368 713 aa10.72□□□□□ -0.69
SNF1YDR477W ROG3P43602 733 aa10.72□□□□□ -0.69
SNF1YDR477W DAS1P47005 663 aa10.72□□□□□ -0.69
SNF1YDR477W CBF1P17106 351 aa10.72□□□□□ -0.69
SNF1YDR477W TFC4P33339 1025 aa10.72□□□□□ -0.69
SNF1YDR477W YBL055CP34220 418 aaPredicted RBP10.72□□□□□ -0.69
SNF1YDR477W YEL1P34225 687 aa10.72□□□□□ -0.69
SNF1YDR477W MSG5P38590 489 aa10.72□□□□□ -0.69
SNF1YDR477W SSP1P38871 571 aa10.72□□□□□ -0.69
SNF1YDR477W SHR3Q02774 210 aa10.72□□□□□ -0.69
SNF1YDR477W WRS1Q12109 432 aaKnown RBP10.72□□□□□ -0.69
SNF1YDR477W KEX2P13134 814 aa10.71□□□□□ -0.69
SNF1YDR477W TRZ1P36159 838 aaPredicted RBP10.71□□□□□ -0.69
SNF1YDR477W VHC1P38329 1120 aa10.71□□□□□ -0.69
SNF1YDR477W HSM3P38348 480 aa10.71□□□□□ -0.69
SNF1YDR477W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69not detected
SNF1YDR477W YML082WQ04533 649 aaKnown RBP10.71□□□□□ -0.69
SNF1YDR477W TDA5Q06417 326 aaKnown RBP10.71□□□□□ -0.69
SNF1YDR477W SUE1Q06524 206 aa10.71□□□□□ -0.69
SNF1YDR477W SPO16P17122 198 aa10.7□□□□□ -0.7
SNF1YDR477W VMA4P22203 233 aaKnown RBP10.7□□□□□ -0.7
SNF1YDR477W ESBP6P53918 673 aa10.7□□□□□ -0.7
SNF1YDR477W FKS1P38631 1876 aaKnown RBP10.7□□□□□ -0.7
SNF1YDR477W ILV1P00927 576 aaKnown RBP10.7□□□□□ -0.7
SNF1YDR477W SIN4P32259 974 aa10.7□□□□□ -0.7
SNF1YDR477W RPC37P36121 282 aa10.7□□□□□ -0.7
SNF1YDR477W CDC27P38042 758 aa10.7□□□□□ -0.7
SNF1YDR477W LIN1P38852 340 aaPredicted RBP10.7□□□□□ -0.7
SNF1YDR477W APL6P46682 809 aa10.7□□□□□ -0.7
SNF1YDR477W SNU71P53207 620 aaKnown RBP10.7□□□□□ -0.7
SNF1YDR477W FUS2Q05670 677 aa10.7□□□□□ -0.7
SNF1YDR477W HEM15P16622 393 aa10.69□□□□□ -0.7
SNF1YDR477W EXO5P38289 585 aa10.69□□□□□ -0.7
SNF1YDR477W RFC3P38629 340 aa10.69□□□□□ -0.7
SNF1YDR477W RPL22BP56628 122 aaKnown RBP10.69□□□□□ -0.7
SNF1YDR477W SAS4Q04003 481 aa10.69□□□□□ -0.7
SNF1YDR477W OXR1Q08952 273 aa10.69□□□□□ -0.7
SNF1YDR477W PSF3Q12146 194 aa10.69□□□□□ -0.7
SNF1YDR477W SPS22P25380 463 aa10.68□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms