RNA–Protein interactions for RNA: YDR176W

NGG1, Transcript of Subunit of chromatin modifying histone acetyltransferase complexes, yeast

Gene NGG1, Length 2,109 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGG1	YDR176W	GPB1	Q08886	897 aa		4.61	□□□□□ -1.67
NGG1	YDR176W	MDM12	Q92328	271 aa		4.61	□□□□□ -1.67
NGG1	YDR176W	PRP6	P19735	899 aa	Predicted RBP	4.61	□□□□□ -1.67
NGG1	YDR176W	MEF1	P25039	761 aa		4.61	□□□□□ -1.67
NGG1	YDR176W	NIT3	P49954	291 aa		4.61	□□□□□ -1.67
NGG1	YDR176W	WHI4	Q07655	649 aa	Known RBP	4.61	□□□□□ -1.67
NGG1	YDR176W	EMC1	P25574	760 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	PSP2	P50109	593 aa	Known RBP	4.6	□□□□□ -1.67
NGG1	YDR176W	DAM1	P53267	343 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	VPS62	P53285	467 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	POB3	Q04636	552 aa	Known RBP	4.6	□□□□□ -1.67
NGG1	YDR176W	THI80	P35202	319 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	SPT20	P50875	604 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	ATP25	Q03153	612 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	YAP6	Q03935	383 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	RXT3	Q07458	294 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	NTG2	Q08214	380 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
NGG1	YDR176W	DAL7	P21826	554 aa		4.59	□□□□□ -1.67
NGG1	YDR176W	CDC20	P26309	610 aa		4.59	□□□□□ -1.67
NGG1	YDR176W	TYE7	P33122	291 aa	Predicted RBP	4.59	□□□□□ -1.67
NGG1	YDR176W	TAD1	P53065	400 aa		4.59	□□□□□ -1.67
NGG1	YDR176W	RIM8	P53179	542 aa		4.59	□□□□□ -1.67
NGG1	YDR176W	YKR011C	Q02209	353 aa		4.59	□□□□□ -1.67
NGG1	YDR176W	UGO1	Q03327	502 aa		4.59	□□□□□ -1.67
NGG1	YDR176W	ACK1	Q07622	623 aa	Predicted RBP	4.59	□□□□□ -1.67
NGG1	YDR176W	HIS5	P07172	385 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	FBP1	P09201	348 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	YCL002C	P25565	263 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	TOD6	P34219	525 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	ATG19	P35193	415 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	URM1	P40554	99 aa	Predicted RBP	4.58	□□□□□ -1.68
NGG1	YDR176W	LRS4	Q04087	347 aa	Known RBP	4.58	□□□□□ -1.68
NGG1	YDR176W	MNN1	P39106	762 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	CHA4	P43634	648 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	NOG2	P53742	486 aa	Known RBP	4.58	□□□□□ -1.68
NGG1	YDR176W	YDR514C	Q04408	483 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	RSC3	Q06639	885 aa		4.58	□□□□□ -1.68
NGG1	YDR176W	NOP12	Q08208	459 aa	Known RBP	4.58	□□□□□ -1.68
NGG1	YDR176W	CDC9	P04819	755 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	VBA3	P25594	458 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	CYS3	P31373	394 aa	Known RBP	4.57	□□□□□ -1.68
NGG1	YDR176W	PEX6	P33760	1030 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	MTC2	P34246	357 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	DSS1	P39112	969 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	YIL108W	P40483	696 aa	Known RBP	4.57	□□□□□ -1.68
NGG1	YDR176W	VPS30	Q02948	557 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	PER1	P25625	357 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	SPC42	P36094	363 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
NGG1	YDR176W	HXT16	P47185	567 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	UPC2	Q12151	913 aa		4.57	□□□□□ -1.68
NGG1	YDR176W	RPS9A	O13516	197 aa	Known RBP	4.56	□□□□□ -1.68
NGG1	YDR176W	NCS6	P53088	359 aa		4.56	□□□□□ -1.68
NGG1	YDR176W	DOS2	P54858	310 aa		4.56	□□□□□ -1.68
NGG1	YDR176W	YLR224W	Q05947	369 aa		4.56	□□□□□ -1.68
NGG1	YDR176W	REH1	Q06709	432 aa		4.56	□□□□□ -1.68
NGG1	YDR176W	HAL9	Q12180	1030 aa		4.56	□□□□□ -1.68
NGG1	YDR176W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
NGG1	YDR176W	LST4	P34239	828 aa		4.55	□□□□□ -1.68
NGG1	YDR176W	YBR182C-A	Q8TGU6	64 aa		4.55	□□□□□ -1.68
NGG1	YDR176W	STE14	P32584	239 aa		4.55	□□□□□ -1.68
NGG1	YDR176W	MCD4	P36051	919 aa		4.55	□□□□□ -1.68
NGG1	YDR176W	YOR022C	Q12204	715 aa		4.55	□□□□□ -1.68
NGG1	YDR176W	NOP14	Q99207	810 aa	Known RBP	4.55	□□□□□ -1.68
NGG1	YDR176W	GSY1	P23337	708 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	BRN1	P38170	754 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	PLB1	P39105	664 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	RPP2A	P05319	106 aa	Known RBP	4.54	□□□□□ -1.68
NGG1	YDR176W	SRD1	P09007	221 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	UBP5	P39944	805 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	SDP1	P40479	209 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	CAF16	P43569	289 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	NPC2	Q12408	173 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	KCS1	Q12494	1050 aa		4.54	□□□□□ -1.68
NGG1	YDR176W	RPL8A	P17076	256 aa	Known RBP	4.53	□□□□□ -1.68
NGG1	YDR176W	SED4	P25365	1065 aa		4.53	□□□□□ -1.68
NGG1	YDR176W	CTF8	P38877	133 aa		4.53	□□□□□ -1.68
NGG1	YDR176W	RLP7	P40693	322 aa	Known RBP	4.53	□□□□□ -1.68
NGG1	YDR176W	PUS2	P53167	370 aa		4.53	□□□□□ -1.68
NGG1	YDR176W	DUS1	P53759	423 aa	Known RBP	4.53	□□□□□ -1.68
NGG1	YDR176W	DNM1	P54861	757 aa		4.53	□□□□□ -1.68
NGG1	YDR176W	TFB2	Q02939	513 aa		4.53	□□□□□ -1.68
NGG1	YDR176W	PRC1	P00729	532 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	STO1	P34160	861 aa	Known RBP	4.52	□□□□□ -1.69
NGG1	YDR176W	SAP190	P36123	1033 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	FPR3	P38911	411 aa	Known RBP	4.52	□□□□□ -1.69
NGG1	YDR176W	YJR142W	P47173	342 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	THI21	Q08975	551 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	YLR358C	O13565	187 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	TMA10	Q06177	86 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	YLR001C	Q07895	862 aa		4.52	□□□□□ -1.69
NGG1	YDR176W	PCL2	P25693	308 aa		4.51	□□□□□ -1.69
NGG1	YDR176W	SET5	P38890	526 aa	Known RBP	4.51	□□□□□ -1.69
NGG1	YDR176W	ALY2	P47029	1046 aa		4.51	□□□□□ -1.69
NGG1	YDR176W	SLU7	Q02775	382 aa	Known RBP	4.51	□□□□□ -1.69
NGG1	YDR176W	UTP14	Q04500	899 aa	Known RBP	4.51	□□□□□ -1.69
NGG1	YDR176W	YDR338C	Q05497	695 aa		4.51	□□□□□ -1.69
NGG1	YDR176W	RAD18	P10862	487 aa		4.51	□□□□□ -1.69
NGG1	YDR176W	IRC24	P40580	263 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 173.1 ms