RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W NOP14Q99207 810 aaKnown RBP4□□□□□ -1.77
SHS1YDL225W VBA3P25594 458 aa3.99□□□□□ -1.77
SHS1YDL225W RPD3P32561 433 aa3.99□□□□□ -1.77
SHS1YDL225W POA1P38218 177 aa3.99□□□□□ -1.77
SHS1YDL225W TY4A-JP47023 414 aa3.99□□□□□ -1.77
SHS1YDL225W PSP2P50109 593 aaKnown RBP3.99□□□□□ -1.77
SHS1YDL225W HDA1P53973 706 aa3.99□□□□□ -1.77
SHS1YDL225W VPS30Q02948 557 aa3.99□□□□□ -1.77
SHS1YDL225W SSL1Q04673 461 aaPredicted RBP3.99□□□□□ -1.77
SHS1YDL225W MET7Q08645 548 aa3.99□□□□□ -1.77
SHS1YDL225W CDC9P04819 755 aa3.98□□□□□ -1.77
SHS1YDL225W GSY1P23337 708 aa3.98□□□□□ -1.77
SHS1YDL225W URA1P28272 314 aaPredicted RBP3.98□□□□□ -1.77
SHS1YDL225W TYE7P33122 291 aaPredicted RBP3.98□□□□□ -1.77
SHS1YDL225W TAD1P53065 400 aa3.98□□□□□ -1.77
SHS1YDL225W NOG2P53742 486 aaKnown RBP3.98□□□□□ -1.77
SHS1YDL225W YKR011CQ02209 353 aa3.98□□□□□ -1.77
SHS1YDL225W DUS4Q06063 367 aa3.98□□□□□ -1.77
SHS1YDL225W RSC3Q06639 885 aa3.98□□□□□ -1.77
SHS1YDL225W TPO1Q07824 586 aa3.98□□□□□ -1.77
SHS1YDL225W RPS9AO13516 197 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W RPL8AP17076 256 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W CYS3P31373 394 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W SFP1P32432 683 aa3.97□□□□□ -1.77
SHS1YDL225W MTC2P34246 357 aa3.97□□□□□ -1.77
SHS1YDL225W TSA1P34760 196 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W YIL108WP40483 696 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W TFB2Q02939 513 aa3.97□□□□□ -1.77
SHS1YDL225W LRS4Q04087 347 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W REH1Q06709 432 aa3.97□□□□□ -1.77
SHS1YDL225W RPS13P05756 151 aaKnown RBP3.97□□□□□ -1.77
SHS1YDL225W SPE1P08432 466 aa3.97□□□□□ -1.77
SHS1YDL225W YCL002CP25565 263 aa3.97□□□□□ -1.77
SHS1YDL225W PER1P25625 357 aa3.97□□□□□ -1.77
SHS1YDL225W ATG19P35193 415 aa3.97□□□□□ -1.77
SHS1YDL225W MET12P46151 657 aa3.97□□□□□ -1.77
SHS1YDL225W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SHS1YDL225W YJR142WP47173 342 aa3.97□□□□□ -1.77
SHS1YDL225W GCN5Q03330 439 aa3.97□□□□□ -1.77
SHS1YDL225W RXT3Q07458 294 aa3.97□□□□□ -1.77
SHS1YDL225W ADY3Q07732 790 aa3.97□□□□□ -1.77
SHS1YDL225W GPB1Q08886 897 aa3.97□□□□□ -1.77
SHS1YDL225W YGR161W-CQ3E744 92 aa3.97□□□□□ -1.77
SHS1YDL225W CDC6P09119 513 aa3.96□□□□□ -1.78
SHS1YDL225W EMC1P25574 760 aa3.96□□□□□ -1.78
SHS1YDL225W AIM3P38266 947 aaKnown RBP3.96□□□□□ -1.78
SHS1YDL225W CAF16P43569 289 aa3.96□□□□□ -1.78
SHS1YDL225W YNL193WP53870 558 aa3.96□□□□□ -1.78
SHS1YDL225W YDR132CQ03900 495 aa3.96□□□□□ -1.78
SHS1YDL225W CDA2Q06703 312 aa3.96□□□□□ -1.78
SHS1YDL225W WHI4Q07655 649 aaKnown RBP3.96□□□□□ -1.78
SHS1YDL225W YPL277CQ08989 487 aa3.96□□□□□ -1.78
SHS1YDL225W ADR1P07248 1323 aa3.96□□□□□ -1.78
SHS1YDL225W SRD1P09007 221 aa3.95□□□□□ -1.78
SHS1YDL225W FBP1P09201 348 aa3.95□□□□□ -1.78
SHS1YDL225W STO1P34160 861 aaKnown RBP3.95□□□□□ -1.78
SHS1YDL225W SAP190P36123 1033 aa3.95□□□□□ -1.78
SHS1YDL225W SPT20P50875 604 aa3.95□□□□□ -1.78
SHS1YDL225W HMI1Q12039 706 aa3.95□□□□□ -1.78
SHS1YDL225W SOD2P00447 233 aa3.94□□□□□ -1.78
SHS1YDL225W HIS5P07172 385 aa3.94□□□□□ -1.78
SHS1YDL225W MCD4P36051 919 aa3.94□□□□□ -1.78
SHS1YDL225W URM1P40554 99 aaPredicted RBP3.94□□□□□ -1.78
SHS1YDL225W CHA4P43634 648 aa3.94□□□□□ -1.78
SHS1YDL225W HXT16P47185 567 aa3.94□□□□□ -1.78
SHS1YDL225W ZDS1P50111 915 aaKnown RBP3.94□□□□□ -1.78
SHS1YDL225W RIM8P53179 542 aa3.94□□□□□ -1.78
SHS1YDL225W VPS62P53285 467 aa3.94□□□□□ -1.78
SHS1YDL225W ACK1Q07622 623 aaPredicted RBP3.94□□□□□ -1.78
SHS1YDL225W YOR022CQ12204 715 aa3.94□□□□□ -1.78
SHS1YDL225W YBR182C-AQ8TGU6 64 aa3.94□□□□□ -1.78
SHS1YDL225W PRC1P00729 532 aa3.94□□□□□ -1.78
SHS1YDL225W RPP2AP05319 106 aaKnown RBP3.94□□□□□ -1.78
SHS1YDL225W RAD18P10862 487 aa3.94□□□□□ -1.78
SHS1YDL225W PRP6P19735 899 aaPredicted RBP3.94□□□□□ -1.78
SHS1YDL225W CDC20P26309 610 aa3.94□□□□□ -1.78
SHS1YDL225W RLP7P40693 322 aaKnown RBP3.94□□□□□ -1.78
SHS1YDL225W ALY2P47029 1046 aa3.94□□□□□ -1.78
SHS1YDL225W PUS2P53167 370 aa3.94□□□□□ -1.78
SHS1YDL225W UPC2Q12151 913 aa3.94□□□□□ -1.78
SHS1YDL225W HAL9Q12180 1030 aa3.94□□□□□ -1.78
SHS1YDL225W YLR358CO13565 187 aa3.93□□□□□ -1.78
SHS1YDL225W PCL2P25693 308 aa3.93□□□□□ -1.78
SHS1YDL225W TOD6P34219 525 aa3.93□□□□□ -1.78
SHS1YDL225W RPN10P38886 268 aaKnown RBP3.93□□□□□ -1.78
SHS1YDL225W SET5P38890 526 aaKnown RBP3.93□□□□□ -1.78
SHS1YDL225W SHR5P41912 237 aa3.93□□□□□ -1.78
SHS1YDL225W HLJ1P48353 224 aa3.93□□□□□ -1.78
SHS1YDL225W SNP1Q00916 300 aaPredicted RBP3.93□□□□□ -1.78
SHS1YDL225W YAP6Q03935 383 aa3.93□□□□□ -1.78
SHS1YDL225W YLR001CQ07895 862 aa3.93□□□□□ -1.78
SHS1YDL225W NOP12Q08208 459 aaKnown RBP3.93□□□□□ -1.78
SHS1YDL225W DIF1O13577 133 aa3.92□□□□□ -1.78
SHS1YDL225W SED4P25365 1065 aa3.92□□□□□ -1.78
SHS1YDL225W CRP1P38845 465 aaKnown RBP3.92□□□□□ -1.78
SHS1YDL225W YNR029CP53729 429 aaKnown RBP3.92□□□□□ -1.78
SHS1YDL225W SFL1P20134 766 aa3.91□□□□□ -1.78
SHS1YDL225W YEL1P34225 687 aa3.91□□□□□ -1.78
SHS1YDL225W PLB1P39105 664 aa3.91□□□□□ -1.78
SHS1YDL225W SDP1P40479 209 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms