RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W URA1P28272 314 aaPredicted RBP6.04□□□□□ -1.44
SHR3YDL212W ATG19P35193 415 aa6.04□□□□□ -1.44
SHR3YDL212W GYP8P43570 497 aa6.04□□□□□ -1.44
SHR3YDL212W PHO23P50947 330 aa6.04□□□□□ -1.44
SHR3YDL212W EXG2P52911 562 aa6.04□□□□□ -1.44
SHR3YDL212W LAS17Q12446 633 aa6.04□□□□□ -1.44
SHR3YDL212W RPP2AP05319 106 aaKnown RBP6.03□□□□□ -1.44
SHR3YDL212W ERR1P0CX10 437 aa6.03□□□□□ -1.44
SHR3YDL212W ERR2P0CX11 437 aa6.03□□□□□ -1.44
SHR3YDL212W GAL11P19659 1081 aa6.03□□□□□ -1.44
SHR3YDL212W RFA1P22336 621 aaKnown RBP6.03□□□□□ -1.44
SHR3YDL212W PBP2P38151 413 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SHR3YDL212W SLU7Q02775 382 aaKnown RBP6.03□□□□□ -1.44
SHR3YDL212W PMA1P05030 918 aaKnown RBP6.02□□□□□ -1.45
SHR3YDL212W MPH2P0CD99 609 aa6.02□□□□□ -1.45
SHR3YDL212W DCG1P32460 244 aa6.02□□□□□ -1.45
SHR3YDL212W SRP40P32583 406 aaPredicted RBP6.02□□□□□ -1.45
SHR3YDL212W YKL091CP33324 310 aaKnown RBP6.02□□□□□ -1.45
SHR3YDL212W YIL108WP40483 696 aaKnown RBP6.02□□□□□ -1.45
SHR3YDL212W CEP3P40969 608 aa6.02□□□□□ -1.45
SHR3YDL212W YKR011CQ02209 353 aa6.02□□□□□ -1.45
SHR3YDL212W HCM1P25364 564 aa6.01□□□□□ -1.45
SHR3YDL212W GGA2P38817 585 aaKnown RBP6.01□□□□□ -1.45
SHR3YDL212W BUD6P41697 788 aa6.01□□□□□ -1.45
SHR3YDL212W YGR283CP53336 341 aaPredicted RBP6.01□□□□□ -1.45
SHR3YDL212W RPN4Q03465 531 aa6.01□□□□□ -1.45
SHR3YDL212W NTO1Q12311 748 aa6.01□□□□□ -1.45
SHR3YDL212W KAR4P25583 335 aa6□□□□□ -1.45
SHR3YDL212W TIM23P32897 222 aa6□□□□□ -1.45
SHR3YDL212W TYE7P33122 291 aaPredicted RBP6□□□□□ -1.45
SHR3YDL212W EMC3P36039 253 aa6□□□□□ -1.45
SHR3YDL212W SDP1P40479 209 aa5.99□□□□□ -1.45
SHR3YDL212W ALG2P43636 503 aa5.99□□□□□ -1.45
SHR3YDL212W MAL11P53048 616 aa5.99□□□□□ -1.45
SHR3YDL212W YOR131CQ12486 218 aa5.99□□□□□ -1.45
SHR3YDL212W SED4P25365 1065 aa5.98□□□□□ -1.45
SHR3YDL212W SEC21P32074 935 aaKnown RBP5.98□□□□□ -1.45
SHR3YDL212W CTF8P38877 133 aa5.98□□□□□ -1.45
SHR3YDL212W TY4A-JP47023 414 aa5.98□□□□□ -1.45
SHR3YDL212W BUL1P48524 976 aa5.98□□□□□ -1.45
SHR3YDL212W VPS30Q02948 557 aa5.98□□□□□ -1.45
SHR3YDL212W LRS4Q04087 347 aaKnown RBP5.98□□□□□ -1.45
SHR3YDL212W DAL7P21826 554 aa5.97□□□□□ -1.45
SHR3YDL212W YCL002CP25565 263 aa5.97□□□□□ -1.45
SHR3YDL212W TAD1P53065 400 aa5.97□□□□□ -1.45
SHR3YDL212W HAL9Q12180 1030 aa5.97□□□□□ -1.45
SHR3YDL212W RPS9AO13516 197 aaKnown RBP5.96□□□□□ -1.46
SHR3YDL212W PHR1P05066 565 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SHR3YDL212W CHZ1P40019 153 aaPredicted RBP5.96□□□□□ -1.46
SHR3YDL212W NIT3P49954 291 aa5.96□□□□□ -1.46
SHR3YDL212W TUB2P02557 457 aaKnown RBP5.95□□□□□ -1.46
SHR3YDL212W TUB3P09734 445 aaKnown RBP5.95□□□□□ -1.46
SHR3YDL212W PFK1P16861 987 aaKnown RBP5.95□□□□□ -1.46
SHR3YDL212W SPC29P33419 253 aa5.95□□□□□ -1.46
SHR3YDL212W TRM2P33753 639 aa5.95□□□□□ -1.46
SHR3YDL212W DEF1P35732 738 aaKnown RBP5.95□□□□□ -1.46
SHR3YDL212W GDH3P39708 457 aa5.95□□□□□ -1.46
SHR3YDL212W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
SHR3YDL212W NOG2P53742 486 aaKnown RBP5.95□□□□□ -1.46
SHR3YDL212W CIT2P08679 460 aa5.94□□□□□ -1.46
SHR3YDL212W PRP4P20053 465 aaKnown RBP5.94□□□□□ -1.46
SHR3YDL212W CYS3P31373 394 aaKnown RBP5.94□□□□□ -1.46
SHR3YDL212W SCT1P32784 759 aa5.94□□□□□ -1.46
SHR3YDL212W MSS4P38994 779 aa5.94□□□□□ -1.46
SHR3YDL212W NUP82P40368 713 aa5.94□□□□□ -1.46
SHR3YDL212W ENB1Q08299 606 aa5.94□□□□□ -1.46
SHR3YDL212W MET7Q08645 548 aa5.94□□□□□ -1.46
SHR3YDL212W GUP2Q08929 609 aa5.94□□□□□ -1.46
SHR3YDL212W YOR022CQ12204 715 aa5.94□□□□□ -1.46
SHR3YDL212W YTA7P40340 1379 aa5.93□□□□□ -1.46
SHR3YDL212W CAD1P24813 409 aaKnown RBP5.93□□□□□ -1.46
SHR3YDL212W PMI40P29952 429 aaKnown RBP5.93□□□□□ -1.46
SHR3YDL212W DAM1P53267 343 aa5.93□□□□□ -1.46
SHR3YDL212W SUN4P53616 420 aa5.93□□□□□ -1.46
SHR3YDL212W DUS1P53759 423 aaKnown RBP5.93□□□□□ -1.46
SHR3YDL212W ERG5P54781 538 aa5.93□□□□□ -1.46
SHR3YDL212W KIN4Q01919 800 aa5.93□□□□□ -1.46
SHR3YDL212W YHR078WP38799 552 aa5.92□□□□□ -1.46
SHR3YDL212W HXT16P47185 567 aa5.92□□□□□ -1.46
SHR3YDL212W PUS2P53167 370 aa5.92□□□□□ -1.46
SHR3YDL212W ATP25Q03153 612 aa5.92□□□□□ -1.46
SHR3YDL212W PUS9Q12069 462 aa5.92□□□□□ -1.46
SHR3YDL212W RAD53P22216 821 aa5.91□□□□□ -1.46
SHR3YDL212W PER1P25625 357 aa5.91□□□□□ -1.46
SHR3YDL212W HRR25P29295 494 aaKnown RBP5.91□□□□□ -1.46
SHR3YDL212W HSV2P50079 448 aaPredicted RBP5.91□□□□□ -1.46
SHR3YDL212W SLI1P53304 468 aa5.91□□□□□ -1.46
SHR3YDL212W TRM13Q12383 476 aa5.91□□□□□ -1.46
SHR3YDL212W AIM21P40563 679 aa5.9□□□□□ -1.46
SHR3YDL212W MSE1P48525 536 aa5.9□□□□□ -1.46
SHR3YDL212W GSF2Q04697 403 aaKnown RBP5.9□□□□□ -1.46
SHR3YDL212W REH1Q06709 432 aa5.9□□□□□ -1.46
SHR3YDL212W PEX19Q07418 342 aa5.9□□□□□ -1.46
SHR3YDL212W YBR182C-AQ8TGU6 64 aa5.9□□□□□ -1.46
SHR3YDL212W PRC1P00729 532 aa5.89□□□□□ -1.47
SHR3YDL212W MEF1P25039 761 aa5.89□□□□□ -1.47
SHR3YDL212W MRPS35P53292 345 aa5.89□□□□□ -1.47
SHR3YDL212W ASI2P53895 289 aa5.89□□□□□ -1.47
SHR3YDL212W YDR514CQ04408 483 aa5.89□□□□□ -1.47
SHR3YDL212W THI21Q08975 551 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms