RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	TY2B-OR1	Q12113	1770 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	TY2B-DR1	Q12472	1770 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	TY2B-OR2	Q12501	1770 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
CMD1	YBR109C	TSL1	P38427	1098 aa	Known RBP	4.28	□□□□□ -1.72
CMD1	YBR109C	GIC1	P38785	314 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	TOK1	P40310	691 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	RRT14	P40470	206 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	GTS1	P40956	396 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	GYP7	P48365	746 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	HFM1	P51979	1187 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	NTG2	Q08214	380 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	PUS9	Q12069	462 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	CAT8	P39113	1433 aa		4.28	□□□□□ -1.72
CMD1	YBR109C	TY1B-DR3	Q99231	1755 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	SSM4	P40318	1319 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	VTH1	P40438	1549 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	VTH2	P40890	1549 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	ACE2	P21192	770 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	AIM26	P32858	118 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	YKR078W	P36158	585 aa	Known RBP	4.27	□□□□□ -1.73
CMD1	YBR109C	SRT1	Q03175	343 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	SVS1	Q12254	260 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	TY2B-B	Q12491	1770 aa		4.27	□□□□□ -1.73
CMD1	YBR109C	FUN30	P31380	1131 aa		4.26	□□□□□ -1.73
CMD1	YBR109C	REC104	P33323	182 aa		4.26	□□□□□ -1.73
CMD1	YBR109C	ETP1	P38748	585 aa	Known RBP	4.26	□□□□□ -1.73
CMD1	YBR109C	YER158C	P40095	573 aa		4.26	□□□□□ -1.73
CMD1	YBR109C	ALG2	P43636	503 aa		4.26	□□□□□ -1.73
CMD1	YBR109C	YJR142W	P47173	342 aa		4.26	□□□□□ -1.73
CMD1	YBR109C	CCM1	P48237	864 aa	Predicted RBP	4.26	□□□□□ -1.73
CMD1	YBR109C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
CMD1	YBR109C	UGO1	Q03327	502 aa		4.26	□□□□□ -1.73
CMD1	YBR109C	UTP14	Q04500	899 aa	Known RBP	4.26	□□□□□ -1.73
CMD1	YBR109C	NOP14	Q99207	810 aa	Known RBP	4.26	□□□□□ -1.73
CMD1	YBR109C	GEA2	P39993	1459 aa	Known RBP	4.25	□□□□□ -1.73
CMD1	YBR109C	SPS1	P08458	490 aa		4.25	□□□□□ -1.73
CMD1	YBR109C	YBR238C	P38330	731 aa	Known RBP	4.25	□□□□□ -1.73
CMD1	YBR109C	SEC26	P41810	973 aa	Known RBP	4.25	□□□□□ -1.73
CMD1	YBR109C	SFB2	P53953	876 aa		4.25	□□□□□ -1.73
CMD1	YBR109C	YGR161W-C	Q3E744	92 aa		4.25	□□□□□ -1.73
CMD1	YBR109C	MDM12	Q92328	271 aa		4.25	□□□□□ -1.73
CMD1	YBR109C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CMD1	YBR109C	RAD53	P22216	821 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	MEF1	P25039	761 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	CDC48	P25694	835 aa	Known RBP	4.24	□□□□□ -1.73
CMD1	YBR109C	PEX6	P33760	1030 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	RFC5	P38251	354 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	GYP8	P43570	497 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	YKE2	P52553	114 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	SLI1	P53304	468 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	DNM1	P54861	757 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	XYL2	Q07993	356 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	ENV7	Q12003	364 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	OSW2	Q12202	724 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	RIB2	Q12362	591 aa	Known RBP	4.24	□□□□□ -1.73
CMD1	YBR109C	ESC1	Q03661	1658 aa	Known RBP	4.24	□□□□□ -1.73
CMD1	YBR109C	ULS1	Q08562	1619 aa		4.24	□□□□□ -1.73
CMD1	YBR109C	TY1B-H	O13535	1793 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-DR5	P0C2I2	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-DR6	P0C2I3	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-LR2	P0C2I5	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-PR2	P0C2J0	1756 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-JR1	P47098	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-ER1	Q03612	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-GR2	Q12269	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-OL	Q12273	1755 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	TY1B-PL	Q12414	1755 aa	Known RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	SPC29	P33419	253 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	PAF1	P38351	445 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	YAP1801	P38856	637 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	YGR283C	P53336	341 aa	Predicted RBP	4.23	□□□□□ -1.73
CMD1	YBR109C	SNO2	P53823	222 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	CDC25	P04821	1589 aa		4.23	□□□□□ -1.73
CMD1	YBR109C	SRB8	P25648	1427 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	SNT2	P53127	1403 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	RPL8A	P17076	256 aa	Known RBP	4.22	□□□□□ -1.73
CMD1	YBR109C	SRM1	P21827	482 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	APL1	P27351	700 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	TRM2	P33753	639 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	EMC3	P36039	253 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	ECM21	P38167	1117 aa	Known RBP	4.22	□□□□□ -1.73
CMD1	YBR109C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CMD1	YBR109C	DSS1	P39112	969 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	TY4A-J	P47023	414 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	TFB2	Q02939	513 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	SIZ1	Q04195	904 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	VPS15	P22219	1454 aa		4.22	□□□□□ -1.73
CMD1	YBR109C	KIN2	P13186	1147 aa	Known RBP	4.21	□□□□□ -1.74
CMD1	YBR109C	RPC82	P32349	654 aa		4.21	□□□□□ -1.74
CMD1	YBR109C	MSE1	P48525	536 aa		4.21	□□□□□ -1.74
CMD1	YBR109C	YPR196W	Q06595	470 aa		4.21	□□□□□ -1.74
CMD1	YBR109C	PDR10	P51533	1564 aa		4.21	□□□□□ -1.74
CMD1	YBR109C	MMS1	Q06211	1407 aa		4.21	□□□□□ -1.74
CMD1	YBR109C	ADR1	P07248	1323 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms