RNA–Protein interactions for RNA: YAL042W

ERV46, Transcript of Protein localized to COPII-coated vesicles, yeast

Gene ERV46, Length 1,248 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERV46	YAL042W	CWC21	Q03375	135 aa	Known RBP	12.86	□□□□□ -0.35
ERV46	YAL042W	GPA1	P08539	472 aa		12.85	□□□□□ -0.35
ERV46	YAL042W	RPL4A	P10664	362 aa	Known RBP	12.85	□□□□□ -0.35
ERV46	YAL042W	RPT1	P33299	467 aa	Known RBP	12.85	□□□□□ -0.35
ERV46	YAL042W	FAF1	P40546	346 aa	Predicted RBP	12.85	□□□□□ -0.35
ERV46	YAL042W	DJP1	P40564	432 aa		12.85	□□□□□ -0.35
ERV46	YAL042W	YPT11	P48559	417 aa		12.85	□□□□□ -0.35
ERV46	YAL042W	RPL4B	P49626	362 aa	Known RBP	12.85	□□□□□ -0.35
ERV46	YAL042W	SHE10	P53075	577 aa		12.85	□□□□□ -0.35
ERV46	YAL042W	APC11	Q12157	165 aa		12.85	□□□□□ -0.35
ERV46	YAL042W	RSA4	P25382	515 aa	Known RBP	12.84	□□□□□ -0.35
ERV46	YAL042W	TRK2	P28584	889 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	ELM1	P32801	640 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	YKL091C	P33324	310 aa	Known RBP	12.84	□□□□□ -0.35
ERV46	YAL042W	HEL1	P36113	551 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	MRPL7	P36519	292 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	MMS4	P38257	691 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	XDJ1	P39102	459 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	HUL4	P40985	892 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	TOS3	P43637	560 aa		12.84	□□□□□ -0.35
ERV46	YAL042W	ASN1	P49089	572 aa	Known RBP	12.84	□□□□□ -0.35
ERV46	YAL042W	ALG11	P53954	548 aa	Known RBP	12.84	□□□□□ -0.35
ERV46	YAL042W	UTP14	Q04500	899 aa	Known RBP	12.84	□□□□□ -0.35
ERV46	YAL042W	CIR1	P42940	261 aa		12.83	□□□□□ -0.36
ERV46	YAL042W	TCO89	Q08921	799 aa		12.83	□□□□□ -0.36
ERV46	YAL042W	CDC53	Q12018	815 aa	Known RBP	12.83	□□□□□ -0.36
ERV46	YAL042W	OSH2	Q12451	1283 aa		12.83	□□□□□ -0.36
ERV46	YAL042W	PRR1	P28708	518 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	CCL1	P37366	393 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	YHR131C	P38835	850 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	YHR202W	P38887	602 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	YER186C	P40101	306 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	ISM1	P48526	1002 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	HSH155	P49955	971 aa	Known RBP	12.82	□□□□□ -0.36
ERV46	YAL042W	LSC2	P53312	427 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	SPO71	Q03868	1245 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	LAA1	P39526	2014 aa		12.82	□□□□□ -0.36
ERV46	YAL042W	RPL22A	P05749	121 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	OM45	P16547	393 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	SEC21	P32074	935 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	MUD1	P32605	298 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	TRM2	P33753	639 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	RFS1	P38234	210 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	SNF7	P39929	240 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	YFL052W	P43551	465 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	VID30	P53076	958 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	SPP1	Q03012	353 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	MLH2	Q07980	695 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	ESC8	Q08119	714 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	DNL4	Q08387	944 aa	Predicted RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	PUS1	Q12211	544 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	PKH2	Q12236	1081 aa	Known RBP	12.81	□□□□□ -0.36
ERV46	YAL042W	MED1	Q12321	566 aa		12.81	□□□□□ -0.36
ERV46	YAL042W	CIT2	P08679	460 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	VMA1	P17255	1071 aa	Known RBP	12.8	□□□□□ -0.36
ERV46	YAL042W	MNR2	P35724	969 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	STB4	P50104	949 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	YNL034W	P53963	612 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	YNL018C	P53976	612 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	SPP382	Q06411	708 aa	Predicted RBP	12.8	□□□□□ -0.36
ERV46	YAL042W	YOL075C	Q08234	1294 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	AFT2	Q08957	416 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	TRS33	Q99394	268 aa		12.8	□□□□□ -0.36
ERV46	YAL042W	POL3	P15436	1097 aa		12.79	□□□□□ -0.36
ERV46	YAL042W	PSO2	P30620	661 aa		12.79	□□□□□ -0.36
ERV46	YAL042W	GCS1	P35197	352 aa		12.79	□□□□□ -0.36
ERV46	YAL042W	LCB2	P40970	561 aa		12.79	□□□□□ -0.36
ERV46	YAL042W	ULI1	P43604	169 aa		12.79	□□□□□ -0.36
ERV46	YAL042W	EEB1	Q02891	456 aa		12.79	□□□□□ -0.36
ERV46	YAL042W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	12.78	□□□□□ -0.36	not detected
ERV46	YAL042W	NPP2	P39997	493 aa		12.78	□□□□□ -0.36
ERV46	YAL042W	RCR2	Q03446	210 aa	Known RBP	12.78	□□□□□ -0.36
ERV46	YAL042W	ETT1	Q08421	412 aa	Known RBP	12.78	□□□□□ -0.36
ERV46	YAL042W	CHS2	P14180	963 aa		12.77	□□□□□ -0.37
ERV46	YAL042W	APM2	P38700	605 aa		12.77	□□□□□ -0.37
ERV46	YAL042W	TIM8	P57744	87 aa		12.77	□□□□□ -0.37
ERV46	YAL042W	HAP5	Q02516	242 aa		12.77	□□□□□ -0.37
ERV46	YAL042W	REC8	Q12188	680 aa		12.77	□□□□□ -0.37
ERV46	YAL042W	SSB1	P11484	613 aa	Known RBP	12.76	□□□□□ -0.37
ERV46	YAL042W	SYN8	P31377	255 aa		12.76	□□□□□ -0.37
ERV46	YAL042W	PEX2	P32800	271 aa		12.76	□□□□□ -0.37
ERV46	YAL042W	RVS167	P39743	482 aa	Known RBP	12.76	□□□□□ -0.37
ERV46	YAL042W	SSB2	P40150	613 aa	Known RBP	12.76	□□□□□ -0.37
ERV46	YAL042W	RSM25	P40496	264 aa		12.76	□□□□□ -0.37
ERV46	YAL042W	YIR016W	P40572	265 aa		12.76	□□□□□ -0.37
ERV46	YAL042W	DON1	Q05610	365 aa		12.76	□□□□□ -0.37
ERV46	YAL042W	ASP3-2	P0CX77	362 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	ASP3-3	P0CX78	362 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	ASP3-4	P0CX79	362 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	ASP3-1	P0CZ17	362 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	RAD54	P32863	898 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	OYE3	P41816	400 aa	Predicted RBP	12.75	□□□□□ -0.37
ERV46	YAL042W	YGR237C	P50089	785 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	SNU56	Q03782	492 aa	Known RBP	12.75	□□□□□ -0.37
ERV46	YAL042W	LCD1	Q04377	747 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	AIM44	Q99299	758 aa		12.75	□□□□□ -0.37
ERV46	YAL042W	BIO2	P32451	375 aa		12.74	□□□□□ -0.37
ERV46	YAL042W	STB5	P38699	743 aa		12.74	□□□□□ -0.37
ERV46	YAL042W	YGR130C	P53278	816 aa		12.74	□□□□□ -0.37
ERV46	YAL042W	CEF1	Q03654	590 aa	Predicted RBP	12.74	□□□□□ -0.37

Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms