RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 ITPK1Q13572 414 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 RC3H1Q5TC82 1133 aaKnown RBP4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 USP31Q70CQ4 1352 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CD99L2Q8TCZ2 262 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 NECAB3Q96P71 396 aaPredicted RBP4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 QRICH2Q9H0J4 1663 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 R3HDMLQ9H3Y0 253 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SRP68Q9UHB9 627 aaKnown RBP4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 AKAP11Q9UKA4 1901 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 C5P01031 1676 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SMG6Q86US8 1419 aaKnown RBP4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 GFRA3O60609 400 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 KRT26Q7Z3Y9 468 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RTKN2Q8IZC4 609 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TSPYL2Q9H2G4 693 aaPredicted RBP4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PTCH2Q9Y6C5 1203 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TRPM7Q96QT4 1865 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 IFT172Q9UG01 1749 aa4.58□□□□□ -1.68
SCARNA4.1-201ENST00000628597 NPHP1O15259 732 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 GJA8P48165 433 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 ST3GAL2Q16842 350 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 AAK1Q2M2I8 961 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RGL3Q3MIN7 710 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PRPF40BQ6NWY9 871 aaKnown RBP4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 C7orf61Q8IZ16 206 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 USP38Q8NB14 1042 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SH3TC2Q8TF17 1288 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PIGBQ92521 554 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 DCPSQ96C86 337 aaKnown RBP4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SHISA4Q96DD7 197 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 BCL2L13Q9BXK5 485 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 GPRC5DQ9NZD1 345 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TRAK1Q9UPV9 953 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 WNK3Q9BYP7 1800 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TRANK1O15050 2925 aa4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 ANKRD11Q6UB99 2663 aaPredicted RBP4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 FLNBO75369 2602 aaKnown RBP4.57□□□□□ -1.68
SCARNA4.1-201ENST00000628597 CCDC88AQ3V6T2 1871 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 USP42Q9H9J4 1324 aaKnown RBP4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 BRCA2P51587 3418 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 GJB1P08034 283 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SYN1P17600 705 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 EIF5P55010 431 aaKnown RBP4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SP3Q02447 781 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 MKRN3Q13064 507 aaKnown RBP4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 UBE2Q1Q7Z7E8 422 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 LTV1Q96GA3 475 aaPredicted RBP4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 BRIP1Q9BX63 1249 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 C14orf93Q9H972 538 aaKnown RBP4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 C11orf16Q9NQ32 467 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 E9PCH4 1651 aa4.56□□□□□ -1.68
SCARNA4.1-201ENST00000628597 ZNF609O15014 1411 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 LAMA3Q16787 3333 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 H7C1D1 291 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 CAPN2P17655 700 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 FKBP1BP68106 108 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TCIRG1Q13488 830 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 NFIXQ14938 502 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 OTUD7BQ6GQQ9 843 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 STYK1Q6J9G0 422 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 DLK2Q6UY11 383 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 LARGE2Q8N3Y3 721 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 MASTLQ96GX5 879 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RBM42Q9BTD8 480 aaKnown RBP4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RNF208Q9H0X6 261 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SH2B1Q9NRF2 756 aaPredicted RBP4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TMOD3Q9NYL9 352 aa4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RBBP6Q7Z6E9 1792 aaKnown RBP4.55□□□□□ -1.68
SCARNA4.1-201ENST00000628597 UBR3Q6ZT12 1888 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TFRCP02786 760 aaKnown RBP4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 INHBEP58166 350 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 CACNB1Q02641 598 aaPredicted RBP4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PRKG1Q13976 671 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 MTFR1Q15390 333 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 CFAP70Q5T0N1 1121 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 USPL1Q5W0Q7 1092 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 LURAP1LQ8IV03 231 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SULF1Q8IWU6 871 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 NIM1KQ8IY84 436 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TRPM4Q8TD43 1214 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RAPGEF4Q8WZA2 1011 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PHOX2BQ99453 314 aa4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 GAS2L1Q99501 681 aaPredicted RBP4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 BIN2Q9UBW5 565 aaPredicted RBP4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 RALYQ9UKM9 306 aaKnown RBP4.54□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TOGARAM1Q9Y4F4 1720 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 DICER1Q9UPY3 1922 aaKnown RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 MED19A0JLT2 244 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PI4K2BG5E9Z4 385 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 BMP1P13497 986 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 HIRAP54198 1017 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 PTPN5P54829 565 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 UBXN2AP68543 259 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TTLL12Q14166 644 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 KIF22Q14807 665 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 NECAB2Q7Z6G3 386 aa4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 U2AF1L4Q8WU68 220 aaKnown RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 LBHD1Q9BQE6 289 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 TTYH1Q9H313 450 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 ASAP1Q9ULH1 1129 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms