RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PHACTR3Q96KR7 559 aa10.34□□□□□ -0.75
TCF4-260ENST00000627685 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
TCF4-260ENST00000627685 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
TCF4-260ENST00000627685 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
TCF4-260ENST00000627685 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 ERVV-2B6SEH9 535 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 GNPATO15228 680 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 FECHP22830 423 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 SIK1P57059 783 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
TCF4-260ENST00000627685 LGR6Q9HBX8 967 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
TCF4-260ENST00000627685 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 MAP3K5Q99683 1374 aa10.33□□□□□ -0.76
TCF4-260ENST00000627685 GPR37O15354 613 aa10.32□□□□□ -0.76
TCF4-260ENST00000627685 RNF40O75150 1001 aa10.32□□□□□ -0.76
TCF4-260ENST00000627685 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
TCF4-260ENST00000627685 COL23A1Q86Y22 540 aaPredicted RBP10.32□□□□□ -0.76
TCF4-260ENST00000627685 PPP4CP60510 307 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
TCF4-260ENST00000627685 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 IL17REQ8NFR9 667 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 MTFR1LQ9H019 292 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 TMOD3Q9NYL9 352 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 PLA2G2EQ9NZK7 142 aa10.31□□□□□ -0.76
TCF4-260ENST00000627685 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
TCF4-260ENST00000627685 SWT1Q5T5J6 900 aaKnown RBP10.3□□□□□ -0.76
TCF4-260ENST00000627685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
TCF4-260ENST00000627685 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
TCF4-260ENST00000627685 MYH14Q7Z406 1995 aaKnown RBP10.3□□□□□ -0.76
TCF4-260ENST00000627685 PRKAR2BP31323 418 aa10.29□□□□□ -0.76
TCF4-260ENST00000627685 NFATC2IPQ8NCF5 419 aa10.29□□□□□ -0.76
TCF4-260ENST00000627685 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
TCF4-260ENST00000627685 SLC52A2Q9HAB3 445 aa10.29□□□□□ -0.76
TCF4-260ENST00000627685 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
TCF4-260ENST00000627685 CNTNAP4Q9C0A0 1308 aa10.29□□□□□ -0.76
TCF4-260ENST00000627685 OATP04181 439 aa10.28□□□□□ -0.76
TCF4-260ENST00000627685 HSP90AB1P08238 724 aaKnown RBP10.28□□□□□ -0.76
TCF4-260ENST00000627685 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
TCF4-260ENST00000627685 KDM3BQ7LBC6 1761 aa10.27□□□□□ -0.77
TCF4-260ENST00000627685 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
TCF4-260ENST00000627685 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
TCF4-260ENST00000627685 DNAJB2P25686 324 aa10.27□□□□□ -0.77
TCF4-260ENST00000627685 SCN7AQ01118 1682 aa10.26□□□□□ -0.77
TCF4-260ENST00000627685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.26□□□□□ -0.77
TCF4-260ENST00000627685 SLC4A3P48751 1232 aa10.26□□□□□ -0.77
TCF4-260ENST00000627685 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
TCF4-260ENST00000627685 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
TCF4-260ENST00000627685 NYAP1Q6ZVC0 841 aa10.26□□□□□ -0.77
TCF4-260ENST00000627685 FHDC1Q9C0D6 1143 aaPredicted RBP10.26□□□□□ -0.77
TCF4-260ENST00000627685 TFCP2L1Q9NZI6 479 aa10.26□□□□□ -0.77
TCF4-260ENST00000627685 KCNQ3O43525 872 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 SSFA2P28290 1259 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 CABP4P57796 275 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 FLAD1Q8NFF5 587 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 PXYLP1Q8TE99 480 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 KIF13BQ9NQT8 1826 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
TCF4-260ENST00000627685 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
TCF4-260ENST00000627685 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 DNAJC10Q8IXB1 793 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 ARXQ96QS3 562 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 SYT17Q9BSW7 474 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
TCF4-260ENST00000627685 SOS1Q07889 1333 aaPredicted RBP10.24□□□□□ -0.77
TCF4-260ENST00000627685 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
TCF4-260ENST00000627685 HEG1Q9ULI3 1381 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
TCF4-260ENST00000627685 PTCD1O75127 700 aaKnown RBP10.23□□□□□ -0.77
TCF4-260ENST00000627685 CYP19A1P11511 503 aaPredicted RBP10.23□□□□□ -0.77
TCF4-260ENST00000627685 CRKLP46109 303 aaKnown RBP10.23□□□□□ -0.77
TCF4-260ENST00000627685 DCTN1Q14203 1278 aa10.23□□□□□ -0.77
TCF4-260ENST00000627685 METTL3Q86U44 580 aaKnown RBP10.23□□□□□ -0.77
TCF4-260ENST00000627685 NLGN2Q8NFZ4 835 aa10.23□□□□□ -0.77
TCF4-260ENST00000627685 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
TCF4-260ENST00000627685 ZNF496Q96IT1 587 aaPredicted RBP10.23□□□□□ -0.77
TCF4-260ENST00000627685 TMEM134Q9H6X4 195 aa10.23□□□□□ -0.77
TCF4-260ENST00000627685 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
TCF4-260ENST00000627685 BCORQ6W2J9 1755 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 GNAT3A8MTJ3 354 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 U2AF1L5P0DN76 240 aaPredicted RBP10.22□□□□□ -0.77
TCF4-260ENST00000627685 POLD1P28340 1107 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 U2AF1Q01081 240 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCF4-260ENST00000627685 RALBP1Q15311 655 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 CCDC184Q52MB2 194 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 CFAP53Q96M91 514 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 PXDNLA1KZ92 1463 aa10.22□□□□□ -0.77
TCF4-260ENST00000627685 PRAMEF22A3QJZ6 481 aa10.21□□□□□ -0.77
TCF4-260ENST00000627685 GYS1P13807 737 aa10.21□□□□□ -0.77
TCF4-260ENST00000627685 MCM10Q7L590 875 aa10.21□□□□□ -0.77
TCF4-260ENST00000627685 AK7Q96M32 723 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms