RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 CCDC66A2RUB6 948 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 TNNI2P48788 182 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 CETN1Q12798 172 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 ZNF397Q8NF99 534 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 TSPY3P0CV98 308 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 TSPY8P0CW00 308 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 UQCRHLA0A096LP55 91 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 UQCRHP07919 91 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 PLS1Q14651 629 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 ATP10AO60312 1499 aa11.35□□□□□ -0.59
CLTCL1-211ENST00000621271 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 JARID2Q92833 1246 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 ANXA1P04083 346 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 CYP7A1P22680 504 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 ANAPC15P60006 121 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 ATP2B3Q16720 1220 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 TCP11L1Q9NUJ3 509 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 A2MP01023 1474 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 FGFR1OPO95684 399 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 TAF4BQ92750 862 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 VPS36Q86VN1 386 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 CALML4Q96GE6 196 aa11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-211ENST00000621271 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 GOLGA6L10A6NI86 522 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 SMTNL1A8MU46 457 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 PLCG2P16885 1265 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC83Q8IWF9 413 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 ZNF408Q9H9D4 720 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 GCP02774 474 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 CNBD1Q8NA66 436 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 NUP62CLQ9H1M0 184 aa11.33□□□□□ -0.6
CLTCL1-211ENST00000621271 KDM6BO15054 1643 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 PPIP5K1Q6PFW1 1433 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 KCNA6P17658 529 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 FAM83GA6ND36 823 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 SYCP3Q8IZU3 236 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 BICD1Q96G01 975 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 DCAF5Q96JK2 942 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 EZRP15311 586 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 AMPD3Q01432 767 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 FERMT3Q86UX7 667 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 SH2B1Q9NRF2 756 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 USP21Q9UK80 565 aa11.32□□□□□ -0.6
CLTCL1-211ENST00000621271 EIF6P56537 245 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 MAGI2Q86UL8 1455 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 RARSP54136 660 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 C20orf194Q5TEA3 1177 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 NFATC2IPQ8NCF5 419 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 IDEP14735 1019 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 GPR162Q16538 588 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 NCOA7Q8NI08 942 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 ERMNQ8TAM6 284 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 NCBP1Q09161 790 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 SKAP1Q86WV1 359 aa11.31□□□□□ -0.6
CLTCL1-211ENST00000621271 EPB41L2O43491 1005 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 APBA3O96018 575 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 HAND2P61296 217 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 MBIPQ9NS73 344 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 ZMYM3Q14202 1370 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 PTPN23Q9H3S7 1636 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 IQCEQ6IPM2 695 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 ESR2Q92731 530 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 CFAP74Q9C0B2 1584 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC174Q6PII3 467 aa11.3□□□□□ -0.6
CLTCL1-211ENST00000621271 ERCC6L2Q5T890 1561 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms