RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
NEAT1-204ENST00000612303 TNS1Q9HBL0 1735 aaKnown RBP16.57■□□□□ 0.24
NEAT1-204ENST00000612303 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
NEAT1-204ENST00000612303 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
NEAT1-204ENST00000612303 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
NEAT1-204ENST00000612303 PROM2Q8N271 834 aa16.57■□□□□ 0.24
NEAT1-204ENST00000612303 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
NEAT1-204ENST00000612303 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
NEAT1-204ENST00000612303 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
NEAT1-204ENST00000612303 TRAPPC3LQ5T215 181 aa16.56■□□□□ 0.24
NEAT1-204ENST00000612303 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
NEAT1-204ENST00000612303 NOP58Q9Y2X3 529 aaKnown RBP16.56■□□□□ 0.24
NEAT1-204ENST00000612303 UBR3Q6ZT12 1888 aa16.55■□□□□ 0.24
NEAT1-204ENST00000612303 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
NEAT1-204ENST00000612303 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
NEAT1-204ENST00000612303 ZBTB47Q9UFB7 747 aaPredicted RBP16.55■□□□□ 0.24
NEAT1-204ENST00000612303 SCN7AQ01118 1682 aa16.54■□□□□ 0.24
NEAT1-204ENST00000612303 ZPR1O75312 459 aa16.54■□□□□ 0.24
NEAT1-204ENST00000612303 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
NEAT1-204ENST00000612303 GPTP24298 496 aa16.54■□□□□ 0.24
NEAT1-204ENST00000612303 FOXO4P98177 505 aa16.54■□□□□ 0.24
NEAT1-204ENST00000612303 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
NEAT1-204ENST00000612303 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
NEAT1-204ENST00000612303 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
NEAT1-204ENST00000612303 SSFA2P28290 1259 aa16.53■□□□□ 0.24
NEAT1-204ENST00000612303 RFC4P35249 363 aa16.53■□□□□ 0.24
NEAT1-204ENST00000612303 JARID2Q92833 1246 aaPredicted RBP16.53■□□□□ 0.24
NEAT1-204ENST00000612303 TRMT112Q9UI30 125 aaKnown RBP16.53■□□□□ 0.24
NEAT1-204ENST00000612303 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
NEAT1-204ENST00000612303 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
NEAT1-204ENST00000612303 LNPKQ9C0E8 428 aa16.52■□□□□ 0.24
NEAT1-204ENST00000612303 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
NEAT1-204ENST00000612303 NIP7Q9Y221 180 aaKnown RBP eCLIP16.52■□□□□ 0.24
NEAT1-204ENST00000612303 USP42Q9H9J4 1324 aaKnown RBP16.51■□□□□ 0.23
NEAT1-204ENST00000612303 PDE4AP27815 886 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 RGS3P49796 1198 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 ERC1Q8IUD2 1116 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 FAM89AQ96GI7 184 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
NEAT1-204ENST00000612303 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
NEAT1-204ENST00000612303 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
NEAT1-204ENST00000612303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.5■□□□□ 0.23
NEAT1-204ENST00000612303 CSF1RP07333 972 aa16.5■□□□□ 0.23
NEAT1-204ENST00000612303 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
NEAT1-204ENST00000612303 KIF1BPQ96EK5 621 aa16.5■□□□□ 0.23
NEAT1-204ENST00000612303 MYH3P11055 1940 aa16.5■□□□□ 0.23
NEAT1-204ENST00000612303 IRS4O14654 1257 aaPredicted RBP16.49■□□□□ 0.23
NEAT1-204ENST00000612303 PDE8AO60658 829 aa16.49■□□□□ 0.23
NEAT1-204ENST00000612303 RTL5Q5HYW3 569 aaPredicted RBP16.49■□□□□ 0.23
NEAT1-204ENST00000612303 AMIGO3Q86WK7 504 aa16.49■□□□□ 0.23
NEAT1-204ENST00000612303 FLAD1Q8NFF5 587 aa16.49■□□□□ 0.23
NEAT1-204ENST00000612303 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
NEAT1-204ENST00000612303 NTSR2O95665 410 aa16.48■□□□□ 0.23
NEAT1-204ENST00000612303 G3BP1Q13283 466 aaKnown RBP eCLIP16.48■□□□□ 0.23
NEAT1-204ENST00000612303 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
NEAT1-204ENST00000612303 SETDB2Q96T68 719 aa16.48■□□□□ 0.23
NEAT1-204ENST00000612303 NYXQ9GZU5 481 aa16.48■□□□□ 0.23
NEAT1-204ENST00000612303 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
NEAT1-204ENST00000612303 EP400Q96L91 3159 aa16.47■□□□□ 0.23
NEAT1-204ENST00000612303 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
NEAT1-204ENST00000612303 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
NEAT1-204ENST00000612303 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
NEAT1-204ENST00000612303 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
NEAT1-204ENST00000612303 CCDC125Q86Z20 511 aa16.47■□□□□ 0.23
NEAT1-204ENST00000612303 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
NEAT1-204ENST00000612303 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
NEAT1-204ENST00000612303 COL24A1Q17RW2 1714 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 PHF14O94880 888 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 BAG6P46379 1132 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 CTSWP56202 376 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
NEAT1-204ENST00000612303 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 TTLL11Q8NHH1 800 aa16.46■□□□□ 0.23
NEAT1-204ENST00000612303 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
NEAT1-204ENST00000612303 LAMB2P55268 1798 aa16.46■□□□□ 0.22
NEAT1-204ENST00000612303 APBB1O00213 710 aa16.45■□□□□ 0.22
NEAT1-204ENST00000612303 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
NEAT1-204ENST00000612303 PLEKHM2Q8IWE5 1019 aa16.45■□□□□ 0.22
NEAT1-204ENST00000612303 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
NEAT1-204ENST00000612303 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
NEAT1-204ENST00000612303 CIAO1O76071 339 aa16.44■□□□□ 0.22
NEAT1-204ENST00000612303 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
NEAT1-204ENST00000612303 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
NEAT1-204ENST00000612303 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
NEAT1-204ENST00000612303 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
NEAT1-204ENST00000612303 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
NEAT1-204ENST00000612303 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
NEAT1-204ENST00000612303 GYS1P13807 737 aa16.43■□□□□ 0.22
NEAT1-204ENST00000612303 EN1Q05925 392 aaPredicted RBP16.43■□□□□ 0.22
NEAT1-204ENST00000612303 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
NEAT1-204ENST00000612303 C16orf71Q8IYS4 520 aaPredicted RBP16.43■□□□□ 0.22
NEAT1-204ENST00000612303 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
NEAT1-204ENST00000612303 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms