RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 PCNTO95613 3336 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 CCDC88AQ3V6T2 1871 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 POLD1P28340 1107 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 ITPK1Q13572 414 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 EIF4A2Q14240 407 aaKnown RBP6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 ELOAQ14241 798 aaKnown RBP6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 RIC3Q7Z5B4 369 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 REM2Q8IYK8 340 aaPredicted RBP6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 ZNF710Q8N1W2 664 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 PIGBQ92521 554 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 ALG2Q9H553 416 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 POLKQ9UBT6 870 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 ATP10DQ9P241 1426 aa6.55□□□□□ -1.36
GAPLINC-202ENST00000579007 ARFGEF2Q9Y6D5 1785 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 WDR90Q96KV7 1748 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 ANKRD62A6NC57 917 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 OATP04181 439 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 PHKG2P15735 406 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 NPDC1Q9NQX5 325 aaPredicted RBP6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 TFIP11Q9UBB9 837 aaKnown RBP6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 TNRC6CQ9HCJ0 1690 aaKnown RBP6.54□□□□□ -1.36
GAPLINC-202ENST00000579007 DLG5Q8TDM6 1919 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 SPTLC1O15269 473 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 PHF14O94880 888 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 HSPA5P11021 654 aaKnown RBP6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 ARID4AP29374 1257 aaPredicted RBP6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 SOX11P35716 441 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 GPR162Q16538 588 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 SLC4A9Q96Q91 983 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 ASAP1Q9ULH1 1129 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 FARP1Q9Y4F1 1045 aaPredicted RBP6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 LAMB4A4D0S4 1761 aa6.53□□□□□ -1.36
GAPLINC-202ENST00000579007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 LOC102724428A0A0B4J2F2 783 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 AP1G2O75843 785 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 USP17L8P0C7I0 530 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 GJA5P36382 358 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 TNNT2P45379 298 aaPredicted RBP6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 SIK1P57059 783 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 METTL3Q86U44 580 aaKnown RBP6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 CERS3Q8IU89 383 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 L3MBTL3Q96JM7 780 aaPredicted RBP6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 ATG3Q9NT62 314 aa6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 DICER1Q9UPY3 1922 aaKnown RBP6.52□□□□□ -1.37
GAPLINC-202ENST00000579007 SSFA2P28290 1259 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 C1QTNF8P60827 252 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 UBE2Q2Q8WVN8 375 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 SMARCC1Q92922 1105 aaPredicted RBP6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 UCN2Q96RP3 112 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 TMOD3Q9NYL9 352 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 WWC3Q9ULE0 1092 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 SPG7Q9UQ90 795 aa6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 MAFBQ9Y5Q3 323 aaPredicted RBP6.51□□□□□ -1.37
GAPLINC-202ENST00000579007 FER1L6Q2WGJ9 1857 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 SOWAHDA6NJG2 315 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 LILRB3O75022 631 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 MARSP56192 900 aaKnown RBP6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 PANK3Q9H999 370 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 CD2APQ9Y5K6 639 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 CNTNAP4Q9C0A0 1308 aa6.5□□□□□ -1.37
GAPLINC-202ENST00000579007 KDM3BQ7LBC6 1761 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 GIGYF1O75420 1035 aaPredicted RBP6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 PHLDB3Q6NSJ2 640 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 RSBN1LQ6PCB5 846 aaPredicted RBP6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 NPAS4Q8IUM7 802 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 PCGF6Q9BYE7 350 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 KIF7Q2M1P5 1343 aa6.49□□□□□ -1.37
GAPLINC-202ENST00000579007 MMP10P09238 476 aa6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 ATP6V1AP38606 617 aa6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 EIF4G2P78344 907 aaKnown RBP eCLIP6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 VAC14Q08AM6 782 aa6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 ZNF530Q6P9A1 599 aaPredicted RBP6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 PXYLP1Q8TE99 480 aa6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 CDHR5Q9HBB8 845 aa6.48□□□□□ -1.37
GAPLINC-202ENST00000579007 CARMIL3Q8ND23 1372 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 KIF3CO14782 793 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 GRIN3BO60391 1043 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 GYS1P13807 737 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 IL13P35225 146 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 MICALL2Q8IY33 904 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 DCAF5Q96JK2 942 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 PSMD1Q99460 953 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 EPAS1Q99814 870 aa6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 USP42Q9H9J4 1324 aaKnown RBP6.47□□□□□ -1.37
GAPLINC-202ENST00000579007 ANKRD33BA6NCL7 494 aa6.46□□□□□ -1.38
GAPLINC-202ENST00000579007 ERVV-2B6SEH9 535 aa6.46□□□□□ -1.38
GAPLINC-202ENST00000579007 GPR37L1O60883 481 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms