RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 FSTL1Q12841 308 aa13.03□□□□□ -0.32
TNRC6A-215ENST00000568903 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
TNRC6A-215ENST00000568903 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
TNRC6A-215ENST00000568903 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.32
TNRC6A-215ENST00000568903 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 ST5P78524 1137 aa13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 ERFEQ4G0M1 354 aa13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 KLRG1Q96E93 195 aa13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 NIP7Q9Y221 180 aaKnown RBP eCLIP13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.33
TNRC6A-215ENST00000568903 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 TTLL7Q6ZT98 887 aa13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 MASTLQ96GX5 879 aa13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 FER1L6Q2WGJ9 1857 aa13.01□□□□□ -0.33
TNRC6A-215ENST00000568903 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
TNRC6A-215ENST00000568903 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
TNRC6A-215ENST00000568903 NBR1Q14596 966 aa13□□□□□ -0.33
TNRC6A-215ENST00000568903 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
TNRC6A-215ENST00000568903 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
TNRC6A-215ENST00000568903 CNKSR1Q969H4 720 aa13□□□□□ -0.33
TNRC6A-215ENST00000568903 TAOK3Q9H2K8 898 aa13□□□□□ -0.33
TNRC6A-215ENST00000568903 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
TNRC6A-215ENST00000568903 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
TNRC6A-215ENST00000568903 MYL6BP14649 208 aa12.99□□□□□ -0.33
TNRC6A-215ENST00000568903 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
TNRC6A-215ENST00000568903 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
TNRC6A-215ENST00000568903 DLG5Q8TDM6 1919 aa12.99□□□□□ -0.33
TNRC6A-215ENST00000568903 POTEHQ6S545 545 aa12.98□□□□□ -0.33
TNRC6A-215ENST00000568903 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
TNRC6A-215ENST00000568903 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
TNRC6A-215ENST00000568903 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 NPR1P16066 1061 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 GPTP24298 496 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 JMYQ8N9B5 988 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 ZBTB3Q9H5J0 574 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
TNRC6A-215ENST00000568903 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
TNRC6A-215ENST00000568903 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
TNRC6A-215ENST00000568903 ANXA1P04083 346 aa12.96□□□□□ -0.33
TNRC6A-215ENST00000568903 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
TNRC6A-215ENST00000568903 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
TNRC6A-215ENST00000568903 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
TNRC6A-215ENST00000568903 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
TNRC6A-215ENST00000568903 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
TNRC6A-215ENST00000568903 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
TNRC6A-215ENST00000568903 DICER1Q9UPY3 1922 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-215ENST00000568903 MAP3K15Q6ZN16 1313 aa12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 PDIA6Q15084 440 aa12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 SYNE4Q8N205 404 aa12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 NECTIN2Q92692 538 aa12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
TNRC6A-215ENST00000568903 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 RIPK4P57078 832 aa12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 FKBP4Q02790 459 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 CCDC146Q8IYE0 955 aa12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 LAMB4A4D0S4 1761 aa12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 COL4A5P29400 1685 aa12.93□□□□□ -0.34
TNRC6A-215ENST00000568903 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 NEFMP07197 916 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 DDX10Q13206 875 aaKnown RBP12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 SNED1Q8TER0 1413 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 TAF1DQ9H5J8 278 aaPredicted RBP12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 NUP98P52948 1817 aa12.92□□□□□ -0.34
TNRC6A-215ENST00000568903 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
TNRC6A-215ENST00000568903 NTSR2O95665 410 aa12.91□□□□□ -0.34
TNRC6A-215ENST00000568903 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
TNRC6A-215ENST00000568903 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
TNRC6A-215ENST00000568903 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-215ENST00000568903 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
TNRC6A-215ENST00000568903 IARSP41252 1262 aaKnown RBP12.9□□□□□ -0.34
TNRC6A-215ENST00000568903 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
TNRC6A-215ENST00000568903 EAPPQ56P03 285 aaPredicted RBP12.9□□□□□ -0.34
TNRC6A-215ENST00000568903 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
TNRC6A-215ENST00000568903 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
TNRC6A-215ENST00000568903 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
TNRC6A-215ENST00000568903 FZD9O00144 591 aa12.89□□□□□ -0.35
TNRC6A-215ENST00000568903 HSPA1AP0DMV8 641 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-215ENST00000568903 HSPA1BP0DMV9 641 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-215ENST00000568903 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms