RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ANKRD31Q8N7Z5 1873 aa22.87■■□□□ 1.25
COMMD4-222ENST00000568034 NEXNQ0ZGT2 675 aa22.86■■□□□ 1.25
COMMD4-222ENST00000568034 NUTM1Q86Y26 1132 aa22.86■■□□□ 1.25
COMMD4-222ENST00000568034 CCDC24Q8N4L8 307 aa22.86■■□□□ 1.25
COMMD4-222ENST00000568034 UTP14AQ9BVJ6 771 aaKnown RBP22.86■■□□□ 1.25
COMMD4-222ENST00000568034 KIAA1551Q9HCM1 1747 aa22.85■■□□□ 1.25
COMMD4-222ENST00000568034 TNRC6CQ9HCJ0 1690 aaKnown RBP22.85■■□□□ 1.25
COMMD4-222ENST00000568034 IPO8O15397 1037 aaKnown RBP22.85■■□□□ 1.25
COMMD4-222ENST00000568034 ZKSCAN2Q63HK3 967 aa22.85■■□□□ 1.25
COMMD4-222ENST00000568034 SLC4A10Q6U841 1118 aa22.85■■□□□ 1.25
COMMD4-222ENST00000568034 PPP1R42Q7Z4L9 355 aa22.85■■□□□ 1.25
COMMD4-222ENST00000568034 NYXQ9GZU5 481 aa22.85■■□□□ 1.25
COMMD4-222ENST00000568034 CWC25Q9NXE8 425 aaPredicted RBP22.85■■□□□ 1.25
COMMD4-222ENST00000568034 ERFEQ4G0M1 354 aa22.84■■□□□ 1.25
COMMD4-222ENST00000568034 TPTE2Q6XPS3 522 aa22.84■■□□□ 1.25
COMMD4-222ENST00000568034 SYNE4Q8N205 404 aa22.84■■□□□ 1.25
COMMD4-222ENST00000568034 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
COMMD4-222ENST00000568034 RIC1Q4ADV7 1423 aa22.83■■□□□ 1.25
COMMD4-222ENST00000568034 GCKRQ14397 625 aa22.83■■□□□ 1.25
COMMD4-222ENST00000568034 SRCIN1Q9C0H9 1055 aa22.83■■□□□ 1.25
COMMD4-222ENST00000568034 TRMT112Q9UI30 125 aaKnown RBP22.83■■□□□ 1.25
COMMD4-222ENST00000568034 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
COMMD4-222ENST00000568034 ALDH1L1O75891 902 aa22.82■■□□□ 1.24
COMMD4-222ENST00000568034 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
COMMD4-222ENST00000568034 SH3TC1Q8TE82 1336 aa22.82■■□□□ 1.24
COMMD4-222ENST00000568034 LAMB2P55268 1798 aa22.81■■□□□ 1.24
COMMD4-222ENST00000568034 PCCAP05165 728 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-222ENST00000568034 RLBP1P12271 317 aa22.81■■□□□ 1.24
COMMD4-222ENST00000568034 CASP7P55210 303 aa22.81■■□□□ 1.24
COMMD4-222ENST00000568034 ST5P78524 1137 aa22.81■■□□□ 1.24
COMMD4-222ENST00000568034 ZBTB38Q8NAP3 1195 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-222ENST00000568034 FAM89AQ96GI7 184 aa22.81■■□□□ 1.24
COMMD4-222ENST00000568034 PPP1R1BQ9UD71 204 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-222ENST00000568034 CD2APQ9Y5K6 639 aa22.81■■□□□ 1.24
COMMD4-222ENST00000568034 COL11A2P13942 1736 aaPredicted RBP22.8■■□□□ 1.24
COMMD4-222ENST00000568034 H7C1W4 665 aa22.8■■□□□ 1.24
COMMD4-222ENST00000568034 PLIN1O60240 522 aa22.8■■□□□ 1.24
COMMD4-222ENST00000568034 SLC10A5Q5PT55 438 aa22.8■■□□□ 1.24
COMMD4-222ENST00000568034 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
COMMD4-222ENST00000568034 CLUAP1Q96AJ1 413 aa22.8■■□□□ 1.24
COMMD4-222ENST00000568034 BRIP1Q9BX63 1249 aa22.8■■□□□ 1.24
COMMD4-222ENST00000568034 CCT4P50991 539 aaKnown RBP22.79■■□□□ 1.24
COMMD4-222ENST00000568034 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
COMMD4-222ENST00000568034 RTL5Q5HYW3 569 aaPredicted RBP22.78■■□□□ 1.24
COMMD4-222ENST00000568034 C3orf67Q6ZVT6 689 aa22.78■■□□□ 1.24
COMMD4-222ENST00000568034 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
COMMD4-222ENST00000568034 CDHR2Q9BYE9 1310 aa22.78■■□□□ 1.24
COMMD4-222ENST00000568034 KLRG2A4D1S0 409 aaPredicted RBP22.77■■□□□ 1.24
COMMD4-222ENST00000568034 NPHP1O15259 732 aa22.77■■□□□ 1.24
COMMD4-222ENST00000568034 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
COMMD4-222ENST00000568034 GTF2E1P29083 439 aaPredicted RBP22.77■■□□□ 1.24
COMMD4-222ENST00000568034 DZIP1LQ8IYY4 767 aaKnown RBP22.77■■□□□ 1.24
COMMD4-222ENST00000568034 KLHL34Q8N239 644 aa22.77■■□□□ 1.24
COMMD4-222ENST00000568034 TMEM57Q8N5G2 664 aa22.77■■□□□ 1.24
COMMD4-222ENST00000568034 SYT17Q9BSW7 474 aa22.77■■□□□ 1.24
COMMD4-222ENST00000568034 UTYO14607 1347 aa22.77■■□□□ 1.24
COMMD4-222ENST00000568034 GRM8O00222 908 aa22.76■■□□□ 1.23
COMMD4-222ENST00000568034 UBE3BQ7Z3V4 1068 aa22.76■■□□□ 1.23
COMMD4-222ENST00000568034 DLEC1Q9Y238 1755 aa22.76■■□□□ 1.23
COMMD4-222ENST00000568034 IRS4O14654 1257 aaPredicted RBP22.75■■□□□ 1.23
COMMD4-222ENST00000568034 RRP1P56182 461 aaKnown RBP22.75■■□□□ 1.23
COMMD4-222ENST00000568034 TGFB2P61812 414 aa22.75■■□□□ 1.23
COMMD4-222ENST00000568034 PANK1Q8TE04 598 aa22.75■■□□□ 1.23
COMMD4-222ENST00000568034 USP44Q9H0E7 712 aa22.75■■□□□ 1.23
COMMD4-222ENST00000568034 CHRNA5P30532 468 aa22.74■■□□□ 1.23
COMMD4-222ENST00000568034 CRY2Q49AN0 593 aa22.74■■□□□ 1.23
COMMD4-222ENST00000568034 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
COMMD4-222ENST00000568034 FTSJ3Q8IY81 847 aaKnown RBP22.74■■□□□ 1.23
COMMD4-222ENST00000568034 BRCA1P38398 1863 aaKnown RBP22.73■■□□□ 1.23
COMMD4-222ENST00000568034 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
COMMD4-222ENST00000568034 DPEP1P16444 411 aa22.73■■□□□ 1.23
COMMD4-222ENST00000568034 KCNA3P22001 575 aa22.73■■□□□ 1.23
COMMD4-222ENST00000568034 PDE6BP35913 854 aa22.73■■□□□ 1.23
COMMD4-222ENST00000568034 PLA2G12BQ9BX93 195 aa22.73■■□□□ 1.23
COMMD4-222ENST00000568034 C2CD5Q86YS7 1000 aa22.72■■□□□ 1.23
COMMD4-222ENST00000568034 C9orf78Q9NZ63 289 aaPredicted RBP22.72■■□□□ 1.23
COMMD4-222ENST00000568034 A0A0G2JLW4 131 aa22.71■■□□□ 1.23
COMMD4-222ENST00000568034 SRGNP10124 158 aa22.71■■□□□ 1.23
COMMD4-222ENST00000568034 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
COMMD4-222ENST00000568034 KAZALD1Q96I82 304 aa22.71■■□□□ 1.23
COMMD4-222ENST00000568034 MEIS3Q99687 375 aa22.71■■□□□ 1.23
COMMD4-222ENST00000568034 PDE8AO60658 829 aa22.7■■□□□ 1.22
COMMD4-222ENST00000568034 SUCLG2Q96I99 432 aa22.7■■□□□ 1.22
COMMD4-222ENST00000568034 NLRP3Q96P20 1036 aa22.7■■□□□ 1.22
COMMD4-222ENST00000568034 MYH3P11055 1940 aa22.7■■□□□ 1.22
COMMD4-222ENST00000568034 COL4A1P02462 1669 aa22.69■■□□□ 1.22
COMMD4-222ENST00000568034 PDE3AQ14432 1141 aa22.69■■□□□ 1.22
COMMD4-222ENST00000568034 SF3B3Q15393 1217 aaKnown RBP22.69■■□□□ 1.22
COMMD4-222ENST00000568034 EPHA10Q5JZY3 1008 aa22.69■■□□□ 1.22
COMMD4-222ENST00000568034 PDZRN3Q9UPQ7 1066 aa22.69■■□□□ 1.22
COMMD4-222ENST00000568034 H0YIN7 160 aa22.68■■□□□ 1.22
COMMD4-222ENST00000568034 MS4A1P11836 297 aa22.68■■□□□ 1.22
COMMD4-222ENST00000568034 CTSWP56202 376 aa22.68■■□□□ 1.22
COMMD4-222ENST00000568034 FOXO4P98177 505 aa22.68■■□□□ 1.22
COMMD4-222ENST00000568034 ITPRIPQ8IWB1 547 aa22.68■■□□□ 1.22
COMMD4-222ENST00000568034 HOXA10P31260 410 aaPredicted RBP22.67■■□□□ 1.22
COMMD4-222ENST00000568034 MVPQ14764 893 aaKnown RBP22.67■■□□□ 1.22
COMMD4-222ENST00000568034 MASTLQ96GX5 879 aa22.67■■□□□ 1.22
COMMD4-222ENST00000568034 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
COMMD4-222ENST00000568034 NPR1P16066 1061 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms