RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 KCNA6P17658 529 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 TNNT2P45379 298 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-210ENST00000567654 RAB15P59190 212 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 DZIP3Q86Y13 1208 aaKnown RBP7.67□□□□□ -1.18
SF3B3-210ENST00000567654 CYP4X1Q8N118 509 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 ADAMTS19Q8TE59 1207 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 SLC10A4Q96EP9 437 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 GGNBP2Q9H3C7 697 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 CGNL1Q0VF96 1302 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 POLR3AO14802 1390 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-210ENST00000567654 NSD2O96028 1365 aa7.67□□□□□ -1.18
SF3B3-210ENST00000567654 FYB1O15117 783 aa7.66□□□□□ -1.18
SF3B3-210ENST00000567654 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
SF3B3-210ENST00000567654 ADAMTS8Q9UP79 889 aa7.66□□□□□ -1.18
SF3B3-210ENST00000567654 INSRP06213 1382 aa7.66□□□□□ -1.18
SF3B3-210ENST00000567654 PIK3R4Q99570 1358 aa7.66□□□□□ -1.18
SF3B3-210ENST00000567654 EDC4Q6P2E9 1401 aaKnown RBP7.66□□□□□ -1.18
SF3B3-210ENST00000567654 IQSEC2Q5JU85 1478 aa7.66□□□□□ -1.18
SF3B3-210ENST00000567654 GFRA3O60609 400 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 RGPD1P0DJD0 1748 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 RGPD2P0DJD1 1756 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 WASHC4Q2M389 1173 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 VIRMAQ69YN4 1812 aaKnown RBP7.65□□□□□ -1.18
SF3B3-210ENST00000567654 VASH1Q7L8A9 365 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-210ENST00000567654 SMG6Q86US8 1419 aaKnown RBP7.65□□□□□ -1.18
SF3B3-210ENST00000567654 ANKLE2Q86XL3 938 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 SNIP1Q8TAD8 396 aaKnown RBP7.65□□□□□ -1.18
SF3B3-210ENST00000567654 LMTK3Q96Q04 1460 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 TRPM3Q9HCF6 1732 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-210ENST00000567654 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.18
SF3B3-210ENST00000567654 RGPD5Q99666 1765 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 SSH2Q76I76 1423 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 FBLN1P23142 703 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 FSHRP23945 695 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 PRR20EP86478 221 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 PRR20CP86479 221 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 PRR20DP86480 221 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 PRR20BP86481 221 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 PRR20AP86496 221 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 HDGFL2Q7Z4V5 671 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-210ENST00000567654 NME9Q86XW9 330 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3B3-210ENST00000567654 WWC1Q8IX03 1113 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 CCDC146Q8IYE0 955 aa7.64□□□□□ -1.19
SF3B3-210ENST00000567654 TRMT44Q8IYL2 757 aaKnown RBP7.64□□□□□ -1.19
SF3B3-210ENST00000567654 LRRC7Q96NW7 1537 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 OVOS2A0A0J9YW53 1432 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 USP6P35125 1406 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 OVOS2Q6IE36 1432 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 GIGYF1O75420 1035 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-210ENST00000567654 NR3C2P08235 984 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 SMPD1P17405 629 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 GRM5P41594 1212 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 MTHFSP49914 203 aa7.63□□□□□ -1.19
SF3B3-210ENST00000567654 KCTD15Q96SI1 283 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-210ENST00000567654 SUPT16HQ9Y5B9 1047 aaKnown RBP7.63□□□□□ -1.19
SF3B3-210ENST00000567654 ADGRL3Q9HAR2 1447 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 ACEP12821 1306 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 FAM187AA6NFU0 413 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 SEMA3FQ13275 785 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 WDR43Q15061 677 aaKnown RBP eCLIP7.62□□□□□ -1.19
SF3B3-210ENST00000567654 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 GLMNQ92990 594 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 CDK15Q96Q40 435 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 WASF2Q9Y6W5 498 aa7.62□□□□□ -1.19
SF3B3-210ENST00000567654 ANKARQ7Z5J8 1434 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 CRYBG1Q9Y4K1 1723 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 KIF1AQ12756 1690 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 ALS2Q96Q42 1657 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 PIK3CDO00329 1044 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 ADH1CP00326 375 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 HSPA2P54652 639 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 NNTQ13423 1086 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 HPS1Q92902 700 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 ALG2Q9H553 416 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 NUDCQ9Y266 331 aa7.61□□□□□ -1.19
SF3B3-210ENST00000567654 CDK12Q9NYV4 1490 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-210ENST00000567654 TTC21BQ7Z4L5 1316 aa7.6□□□□□ -1.19
SF3B3-210ENST00000567654 ZNF521Q96K83 1311 aa7.6□□□□□ -1.19
SF3B3-210ENST00000567654 IRX6P78412 446 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-210ENST00000567654 INTS6LQ5JSJ4 861 aaKnown RBP7.6□□□□□ -1.19
SF3B3-210ENST00000567654 IRX2Q9BZI1 471 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-210ENST00000567654 C1orf115Q9H7X2 142 aa7.6□□□□□ -1.19
SF3B3-210ENST00000567654 TMPRSS4Q9NRS4 437 aa7.6□□□□□ -1.19
SF3B3-210ENST00000567654 PNPLA6Q8IY17 1366 aa7.59□□□□□ -1.19
SF3B3-210ENST00000567654 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
SF3B3-210ENST00000567654 MAP4K5Q9Y4K4 846 aa7.59□□□□□ -1.19
SF3B3-210ENST00000567654 PHRF1Q9P1Y6 1649 aaKnown RBP7.59□□□□□ -1.19
SF3B3-210ENST00000567654 NRG2O14511 850 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-210ENST00000567654 APAF1O14727 1248 aa7.58□□□□□ -1.2
SF3B3-210ENST00000567654 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
SF3B3-210ENST00000567654 MPNDQ8N594 471 aa7.58□□□□□ -1.2
SF3B3-210ENST00000567654 CCDC85AQ96PX6 553 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-210ENST00000567654 UCN2Q96RP3 112 aa7.58□□□□□ -1.2
SF3B3-210ENST00000567654 POLKQ9UBT6 870 aa7.58□□□□□ -1.2
SF3B3-210ENST00000567654 EMILIN1Q9Y6C2 1016 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms