RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 AACSQ86V21 672 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 UBE2Q2Q8WVN8 375 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 ERC2O15083 957 aa11.51□□□□□ -0.57
LINC00838-201ENST00000562956 IFIT2P09913 472 aaKnown RBP11.51□□□□□ -0.57
LINC00838-201ENST00000562956 CHMLP26374 656 aa11.51□□□□□ -0.57
LINC00838-201ENST00000562956 EAF2Q96CJ1 260 aaPredicted RBP11.51□□□□□ -0.57
LINC00838-201ENST00000562956 COPRSQ9NQ92 184 aa11.51□□□□□ -0.57
LINC00838-201ENST00000562956 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
LINC00838-201ENST00000562956 TTC41PQ6P2S7 1318 aa11.51□□□□□ -0.57
LINC00838-201ENST00000562956 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
LINC00838-201ENST00000562956 KCNQ2O43526 872 aa11.5□□□□□ -0.57
LINC00838-201ENST00000562956 HLFQ16534 295 aa11.5□□□□□ -0.57
LINC00838-201ENST00000562956 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
LINC00838-201ENST00000562956 TUBGCP6Q96RT7 1819 aa11.5□□□□□ -0.57
LINC00838-201ENST00000562956 ESYT1Q9BSJ8 1104 aa11.5□□□□□ -0.57
LINC00838-201ENST00000562956 ECHDC1Q9NTX5 307 aa11.5□□□□□ -0.57
LINC00838-201ENST00000562956 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
LINC00838-201ENST00000562956 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.5□□□□□ -0.57
LINC00838-201ENST00000562956 REC8O95072 547 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 GIGYF2Q6Y7W6 1299 aaKnown RBP11.49□□□□□ -0.57
LINC00838-201ENST00000562956 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
LINC00838-201ENST00000562956 CHMP3Q9Y3E7 222 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 TJP1Q07157 1748 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 GLRX3O76003 335 aaKnown RBP11.49□□□□□ -0.57
LINC00838-201ENST00000562956 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
LINC00838-201ENST00000562956 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 LOC102724428A0A0B4J2F2 783 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 SIK1P57059 783 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 USP21Q9UK80 565 aa11.49□□□□□ -0.57
LINC00838-201ENST00000562956 TFCP2Q12800 502 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 INTS5Q6P9B9 1019 aaKnown RBP11.48□□□□□ -0.57
LINC00838-201ENST00000562956 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 SNX21Q969T3 373 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 GPATCH3Q96I76 525 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 IL25Q9H293 177 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 SLKQ9H2G2 1235 aaPredicted RBP11.48□□□□□ -0.57
LINC00838-201ENST00000562956 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
LINC00838-201ENST00000562956 GPTP24298 496 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
LINC00838-201ENST00000562956 ITPK1Q13572 414 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 CNTROBQ8N137 903 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 PALLDQ8WX93 1383 aa11.48□□□□□ -0.57
LINC00838-201ENST00000562956 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
LINC00838-201ENST00000562956 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
LINC00838-201ENST00000562956 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
LINC00838-201ENST00000562956 SYNE4Q8N205 404 aa11.47□□□□□ -0.57
LINC00838-201ENST00000562956 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
LINC00838-201ENST00000562956 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
LINC00838-201ENST00000562956 HSPA1LP34931 641 aa11.46□□□□□ -0.57
LINC00838-201ENST00000562956 TNNI3KQ59H18 835 aa11.46□□□□□ -0.57
LINC00838-201ENST00000562956 NLRP10Q86W26 655 aa11.46□□□□□ -0.57
LINC00838-201ENST00000562956 ZBTB38Q8NAP3 1195 aaPredicted RBP11.46□□□□□ -0.57
LINC00838-201ENST00000562956 CCDC87Q9NVE4 849 aa11.46□□□□□ -0.57
LINC00838-201ENST00000562956 FPGT-TNNI3KV9GXZ4 949 aa11.46□□□□□ -0.57
LINC00838-201ENST00000562956 EIF5P55010 431 aaKnown RBP11.46□□□□□ -0.57
LINC00838-201ENST00000562956 AEBP2Q6ZN18 517 aaPredicted RBP11.46□□□□□ -0.57
LINC00838-201ENST00000562956 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
LINC00838-201ENST00000562956 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
LINC00838-201ENST00000562956 PTF1AQ7RTS3 328 aa11.46□□□□□ -0.58
LINC00838-201ENST00000562956 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.58
LINC00838-201ENST00000562956 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.58
LINC00838-201ENST00000562956 ERVV-1B6SEH8 477 aa11.45□□□□□ -0.58
LINC00838-201ENST00000562956 HSP90AB3PQ58FF7 597 aa11.45□□□□□ -0.58
LINC00838-201ENST00000562956 RABEP1Q15276 862 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 LRRC24Q50LG9 513 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
LINC00838-201ENST00000562956 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
LINC00838-201ENST00000562956 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
LINC00838-201ENST00000562956 PLA2G12BQ9BX93 195 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 BOLA2Q9H3K6 86 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 UBN2Q6ZU65 1347 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 SGSM2O43147 1006 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 CWC27Q6UX04 472 aaKnown RBP11.44□□□□□ -0.58
LINC00838-201ENST00000562956 EVI5LQ96CN4 794 aa11.44□□□□□ -0.58
LINC00838-201ENST00000562956 FAM182BQ5T319 152 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 DBNDD2Q9BQY9 259 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
LINC00838-201ENST00000562956 CDHR2Q9BYE9 1310 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 EYA2O00167 538 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 CSF1RP07333 972 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 KCNQ4P56696 695 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 CCDC57Q2TAC2 916 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 ZNF34Q8IZ26 560 aa11.43□□□□□ -0.58
LINC00838-201ENST00000562956 IL15P40933 162 aaPredicted RBP11.42□□□□□ -0.58
LINC00838-201ENST00000562956 NFKBIBQ15653 356 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
LINC00838-201ENST00000562956 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 K7ELQ4 463 aaPredicted RBP11.42□□□□□ -0.58
LINC00838-201ENST00000562956 GJD4Q96KN9 370 aaPredicted RBP11.42□□□□□ -0.58
LINC00838-201ENST00000562956 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 AFF2P51816 1311 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 CIAO1O76071 339 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 CAMTA2O94983 1202 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 ATP5JP18859 108 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 LINC00116Q8NCU8 138 aa11.42□□□□□ -0.58
LINC00838-201ENST00000562956 IRS4O14654 1257 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms