RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 UPF3BQ9BZI7 483 aaKnown RBP10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 MYRIPQ8NFW9 859 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 FSD1Q9BTV5 496 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 PHAXQ9H814 394 aaKnown RBP10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 AOX1Q06278 1338 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 SDF4Q9BRK5 362 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 TSPYL1Q9H0U9 437 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 MAP3K2Q9Y2U5 619 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 FEZ1Q99689 392 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 NUTM2BA6NNL0 878 aaPredicted RBP10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 NUTM2EB1AL46 878 aaPredicted RBP10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 PTCD1O75127 700 aaKnown RBP10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 PIP4K2BP78356 416 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 NUTM2AQ8IVF1 878 aaPredicted RBP10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 IL2RBP14784 551 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 GORABQ5T7V8 394 aa10.72□□□□□ -0.69
CLUHP3-206ENST00000562354 CRB1P82279 1406 aa10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 CCDC171Q6TFL3 1326 aa10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 KCNQ3O43525 872 aa10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 TUBB4AP04350 444 aa10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 CASTP20810 708 aaKnown RBP10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 GAS2L3Q86XJ1 694 aa10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 DHX16O60231 1041 aaKnown RBP10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 NOM1Q5C9Z4 860 aaKnown RBP10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
CLUHP3-206ENST00000562354 XRN1Q8IZH2 1706 aaKnown RBP10.71□□□□□ -0.7
CLUHP3-206ENST00000562354 GSDMDP57764 484 aa10.71□□□□□ -0.7
CLUHP3-206ENST00000562354 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.7
CLUHP3-206ENST00000562354 USP48Q86UV5 1035 aa10.71□□□□□ -0.7
CLUHP3-206ENST00000562354 TMOD3Q9NYL9 352 aa10.71□□□□□ -0.7
CLUHP3-206ENST00000562354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.71□□□□□ -0.7
CLUHP3-206ENST00000562354 CPLX1O14810 134 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 KIF20AO95235 890 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 PTPN14Q15678 1187 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 ZNF790Q6PG37 636 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 KIF18AQ8NI77 898 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 SLC52A2Q9HAB3 445 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 IL1RAPL2Q9NP60 686 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 ADAMTSL3P82987 1691 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 ADAMTS2O95450 1211 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 PHKG2P15735 406 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 KSR2Q6VAB6 950 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 ANO10Q9NW15 660 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 AKAP12Q02952 1782 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 PCDH11XQ9BZA7 1347 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 PCDH11YQ9BZA8 1340 aa10.7□□□□□ -0.7
CLUHP3-206ENST00000562354 BRD1O95696 1058 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 TNNT1P13805 278 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 CBX1P83916 185 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 ZGPATQ8N5A5 531 aaKnown RBP10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 KDM4AO75164 1064 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 F13A1P00488 732 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 ATP8B2P98198 1209 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 TRIM29Q14134 588 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 CCDC83Q8IWF9 413 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 JMYQ8N9B5 988 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 MYD88Q99836 296 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 ALDH1L1O75891 902 aa10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 CWC27Q6UX04 472 aaKnown RBP10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 DDX21Q9NR30 783 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLUHP3-206ENST00000562354 DCCP43146 1447 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 XAGE3Q8WTP9 111 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 HMG20BQ9P0W2 317 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 CCDC70Q6NSX1 233 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 ERCC4Q92889 916 aaPredicted RBP10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 AK7Q96M32 723 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 FMN2Q9NZ56 1722 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 MST1RQ04912 1400 aa10.68□□□□□ -0.7
CLUHP3-206ENST00000562354 KIF6Q6ZMV9 814 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 CREBRFQ8IUR6 639 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 EVI5LQ96CN4 794 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 CLIP2Q9UDT6 1046 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 CHMLP26374 656 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 GJB2P29033 226 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 FILIP1Q7Z7B0 1213 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 MPNDQ8N594 471 aa10.67□□□□□ -0.7
CLUHP3-206ENST00000562354 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms