RNA–Protein interactions for RNA: ENST00000561977.1

AC112236.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC112236.1, Length 1,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC112236.1-201ENST00000561977 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 TGFB2P61812 414 aa12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 GPR162Q16538 588 aa12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
AC112236.1-201ENST00000561977 MMP10P09238 476 aa12.67□□□□□ -0.38
AC112236.1-201ENST00000561977 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
AC112236.1-201ENST00000561977 ERBB4Q15303 1308 aa12.66□□□□□ -0.38
AC112236.1-201ENST00000561977 GYS1P13807 737 aa12.66□□□□□ -0.38
AC112236.1-201ENST00000561977 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
AC112236.1-201ENST00000561977 SLC24A3Q9HC58 644 aa12.66□□□□□ -0.38
AC112236.1-201ENST00000561977 CHD4Q14839 1912 aa12.66□□□□□ -0.38
AC112236.1-201ENST00000561977 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
AC112236.1-201ENST00000561977 ARSIQ5FYB1 569 aa12.65□□□□□ -0.38
AC112236.1-201ENST00000561977 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
AC112236.1-201ENST00000561977 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
AC112236.1-201ENST00000561977 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
AC112236.1-201ENST00000561977 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
AC112236.1-201ENST00000561977 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
AC112236.1-201ENST00000561977 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
AC112236.1-201ENST00000561977 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
AC112236.1-201ENST00000561977 ADAMTS8Q9UP79 889 aa12.64□□□□□ -0.39
AC112236.1-201ENST00000561977 KIF13BQ9NQT8 1826 aa12.63□□□□□ -0.39
AC112236.1-201ENST00000561977 NPHP1O15259 732 aa12.63□□□□□ -0.39
AC112236.1-201ENST00000561977 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
AC112236.1-201ENST00000561977 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
AC112236.1-201ENST00000561977 HOXB7P09629 217 aa12.62□□□□□ -0.39
AC112236.1-201ENST00000561977 YY1P25490 414 aa12.62□□□□□ -0.39
AC112236.1-201ENST00000561977 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
AC112236.1-201ENST00000561977 CARMIL3Q8ND23 1372 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 SLC34A2O95436 690 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 EIF4A1P60842 406 aaKnown RBP12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 GNAI1P63096 354 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 SMYD5Q6GMV2 418 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 SETDB2Q96T68 719 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
AC112236.1-201ENST00000561977 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
AC112236.1-201ENST00000561977 TM4SF1P30408 202 aa12.6□□□□□ -0.39
AC112236.1-201ENST00000561977 ST5P78524 1137 aa12.6□□□□□ -0.39
AC112236.1-201ENST00000561977 E2F4Q16254 413 aa12.6□□□□□ -0.39
AC112236.1-201ENST00000561977 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
AC112236.1-201ENST00000561977 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
AC112236.1-201ENST00000561977 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
AC112236.1-201ENST00000561977 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
AC112236.1-201ENST00000561977 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
AC112236.1-201ENST00000561977 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
AC112236.1-201ENST00000561977 BCORQ6W2J9 1755 aa12.58□□□□□ -0.39
AC112236.1-201ENST00000561977 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 KCNQ3O43525 872 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 A1BGP04217 495 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 SERPINB2P05120 415 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 PDE6BP35913 854 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
AC112236.1-201ENST00000561977 NFIXQ14938 502 aa12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 TPTE2Q6XPS3 522 aa12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 TBC1D2BQ9UPU7 963 aa12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
AC112236.1-201ENST00000561977 H0YIN7 160 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 CHL1O00533 1208 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 APAF1O14727 1248 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 TMC2Q8TDI7 906 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
AC112236.1-201ENST00000561977 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
AC112236.1-201ENST00000561977 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
AC112236.1-201ENST00000561977 DALRD3Q5D0E6 543 aaKnown RBP12.55□□□□□ -0.4
AC112236.1-201ENST00000561977 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
AC112236.1-201ENST00000561977 BRIP1Q9BX63 1249 aa12.55□□□□□ -0.4
AC112236.1-201ENST00000561977 AFDNP55196 1824 aaKnown RBP12.55□□□□□ -0.4
AC112236.1-201ENST00000561977 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 SEMA3EO15041 775 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 ZMYND10O75800 440 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 MAP3K15Q6ZN16 1313 aa12.54□□□□□ -0.4
AC112236.1-201ENST00000561977 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
AC112236.1-201ENST00000561977 DDR1Q08345 913 aa12.53□□□□□ -0.4
AC112236.1-201ENST00000561977 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
AC112236.1-201ENST00000561977 TBC1D9BQ66K14 1250 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms