RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CWF19L2Q2TBE0 894 aaKnown RBP14.69□□□□□ -0.06
HERC1-214ENST00000561400 BEND3Q5T5X7 828 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 RGL2O15211 777 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 GPTP24298 496 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 TBC1D9BQ66K14 1250 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 ZNF652Q9Y2D9 606 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
HERC1-214ENST00000561400 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
HERC1-214ENST00000561400 ZNF34Q8IZ26 560 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 ISCA1Q9BUE6 129 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 ATP10DQ9P241 1426 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 UBN2Q6ZU65 1347 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 NEXNQ0ZGT2 675 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 PDE3AQ14432 1141 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 INTS3Q68E01 1043 aaKnown RBP14.68□□□□□ -0.06
HERC1-214ENST00000561400 LINS1Q8NG48 757 aa14.68□□□□□ -0.06
HERC1-214ENST00000561400 NEURL1BA8MQ27 555 aa14.67□□□□□ -0.06
HERC1-214ENST00000561400 MSL1Q68DK7 614 aa14.67□□□□□ -0.06
HERC1-214ENST00000561400 BICDL1Q6ZP65 573 aa14.67□□□□□ -0.06
HERC1-214ENST00000561400 SRCIN1Q9C0H9 1055 aa14.67□□□□□ -0.06
HERC1-214ENST00000561400 NIP7Q9Y221 180 aaKnown RBP eCLIP14.67□□□□□ -0.06
HERC1-214ENST00000561400 TRIM28Q13263 835 aaKnown RBP14.66□□□□□ -0.06
HERC1-214ENST00000561400 COL24A1Q17RW2 1714 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 MS4A1P11836 297 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 TM4SF1P30408 202 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 CCT4P50991 539 aaKnown RBP14.66□□□□□ -0.06
HERC1-214ENST00000561400 NFIXQ14938 502 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 NLRP10Q86W26 655 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 NLGN1Q8N2Q7 840 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 COG6Q9Y2V7 657 aa14.66□□□□□ -0.06
HERC1-214ENST00000561400 IPO4Q8TEX9 1081 aaKnown RBP14.65□□□□□ -0.06
HERC1-214ENST00000561400 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
HERC1-214ENST00000561400 NBR1Q14596 966 aa14.65□□□□□ -0.06
HERC1-214ENST00000561400 CCDC191Q8NCU4 936 aa14.65□□□□□ -0.06
HERC1-214ENST00000561400 SLC16A10Q8TF71 515 aa14.65□□□□□ -0.06
HERC1-214ENST00000561400 SETDB2Q96T68 719 aa14.65□□□□□ -0.06
HERC1-214ENST00000561400 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
HERC1-214ENST00000561400 GCKRQ14397 625 aa14.64□□□□□ -0.07
HERC1-214ENST00000561400 SUSD4Q5VX71 490 aa14.64□□□□□ -0.07
HERC1-214ENST00000561400 ITPRIPQ8IWB1 547 aa14.64□□□□□ -0.07
HERC1-214ENST00000561400 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
HERC1-214ENST00000561400 RRP9O43818 475 aaKnown RBP14.64□□□□□ -0.07
HERC1-214ENST00000561400 ZBTB7AO95365 584 aa14.64□□□□□ -0.07
HERC1-214ENST00000561400 MVPQ14764 893 aaKnown RBP14.64□□□□□ -0.07
HERC1-214ENST00000561400 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
HERC1-214ENST00000561400 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
HERC1-214ENST00000561400 DDR1Q08345 913 aa14.63□□□□□ -0.07
HERC1-214ENST00000561400 USP44Q9H0E7 712 aa14.63□□□□□ -0.07
HERC1-214ENST00000561400 BCCIPQ9P287 314 aaKnown RBP eCLIP14.63□□□□□ -0.07
HERC1-214ENST00000561400 PARP10Q53GL7 1025 aa14.62□□□□□ -0.07
HERC1-214ENST00000561400 JARID2Q92833 1246 aaPredicted RBP14.62□□□□□ -0.07
HERC1-214ENST00000561400 CHMP4BQ9H444 224 aaKnown RBP14.62□□□□□ -0.07
HERC1-214ENST00000561400 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
HERC1-214ENST00000561400 POLRMTO00411 1230 aaKnown RBP14.62□□□□□ -0.07
HERC1-214ENST00000561400 MMP10P09238 476 aa14.62□□□□□ -0.07
HERC1-214ENST00000561400 SYNE4Q8N205 404 aa14.62□□□□□ -0.07
HERC1-214ENST00000561400 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
HERC1-214ENST00000561400 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
HERC1-214ENST00000561400 CARMIL3Q8ND23 1372 aa14.62□□□□□ -0.07
HERC1-214ENST00000561400 NTSR2O95665 410 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
HERC1-214ENST00000561400 FAM89AQ96GI7 184 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 MEIS3Q99687 375 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
HERC1-214ENST00000561400 IBTKQ9P2D0 1353 aaPredicted RBP14.61□□□□□ -0.07
HERC1-214ENST00000561400 GRM8O00222 908 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 ZBTB7BO15156 539 aaPredicted RBP14.61□□□□□ -0.07
HERC1-214ENST00000561400 PPP1R42Q7Z4L9 355 aa14.61□□□□□ -0.07
HERC1-214ENST00000561400 TRMT112Q9UI30 125 aaKnown RBP14.61□□□□□ -0.07
HERC1-214ENST00000561400 H7C1W4 665 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 SERPINB2P05120 415 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 NUTM1Q86Y26 1132 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 UTP14AQ9BVJ6 771 aaKnown RBP14.6□□□□□ -0.07
HERC1-214ENST00000561400 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
HERC1-214ENST00000561400 UTYO14607 1347 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 PCCAP05165 728 aaPredicted RBP14.6□□□□□ -0.07
HERC1-214ENST00000561400 CASP7P55210 303 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 NBPF5PQ86XG9 351 aaPredicted RBP14.6□□□□□ -0.07
HERC1-214ENST00000561400 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
HERC1-214ENST00000561400 DDX19BQ9UMR2 479 aa14.6□□□□□ -0.07
HERC1-214ENST00000561400 DDX60Q8IY21 1712 aaKnown RBP14.59□□□□□ -0.07
HERC1-214ENST00000561400 CCDC24Q8N4L8 307 aa14.59□□□□□ -0.07
HERC1-214ENST00000561400 PRR5LQ6MZQ0 368 aa14.58□□□□□ -0.07
HERC1-214ENST00000561400 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.07
HERC1-214ENST00000561400 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.07
HERC1-214ENST00000561400 PARP3Q9Y6F1 533 aa14.58□□□□□ -0.07
HERC1-214ENST00000561400 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.08
HERC1-214ENST00000561400 HSP90AA2PQ14568 343 aaPredicted RBP14.58□□□□□ -0.08
HERC1-214ENST00000561400 ERFEQ4G0M1 354 aa14.58□□□□□ -0.08
HERC1-214ENST00000561400 NYXQ9GZU5 481 aa14.58□□□□□ -0.08
HERC1-214ENST00000561400 MYH3P11055 1940 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
HERC1-214ENST00000561400 KAZALD1Q96I82 304 aa14.57□□□□□ -0.08
HERC1-214ENST00000561400 SGIP1Q9BQI5 828 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms