RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ESPNB1AK53 854 aa11.27□□□□□ -0.61
SPG11-213ENST00000558988 C2CD2LO14523 706 aa11.27□□□□□ -0.61
SPG11-213ENST00000558988 ITGAEP38570 1179 aa11.27□□□□□ -0.61
SPG11-213ENST00000558988 SPATA31D1Q6ZQQ2 1576 aa11.27□□□□□ -0.61
SPG11-213ENST00000558988 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
SPG11-213ENST00000558988 LRRN4Q8WUT4 740 aa11.26□□□□□ -0.61
SPG11-213ENST00000558988 DISP3Q9P2K9 1392 aa11.26□□□□□ -0.61
SPG11-213ENST00000558988 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
SPG11-213ENST00000558988 PIP4K2BP78356 416 aa11.25□□□□□ -0.61
SPG11-213ENST00000558988 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
SPG11-213ENST00000558988 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
SPG11-213ENST00000558988 GPSM3Q9Y4H4 160 aa11.25□□□□□ -0.61
SPG11-213ENST00000558988 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
SPG11-213ENST00000558988 EPXP11678 715 aa11.24□□□□□ -0.61
SPG11-213ENST00000558988 BMP4P12644 408 aa11.24□□□□□ -0.61
SPG11-213ENST00000558988 NR6A1Q15406 480 aa11.24□□□□□ -0.61
SPG11-213ENST00000558988 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
SPG11-213ENST00000558988 GPAMQ9HCL2 828 aa11.24□□□□□ -0.61
SPG11-213ENST00000558988 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
SPG11-213ENST00000558988 KRTAP4-7Q9BYR0 210 aa11.23□□□□□ -0.61
SPG11-213ENST00000558988 DEPDC5O75140 1603 aa11.23□□□□□ -0.61
SPG11-213ENST00000558988 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
SPG11-213ENST00000558988 WASLO00401 505 aaPredicted RBP11.22□□□□□ -0.61
SPG11-213ENST00000558988 UBAP2LQ14157 1087 aaKnown RBP11.22□□□□□ -0.61
SPG11-213ENST00000558988 BARGINQ6ZT62 677 aa11.22□□□□□ -0.61
SPG11-213ENST00000558988 TAS1R3Q7RTX0 852 aa11.22□□□□□ -0.61
SPG11-213ENST00000558988 TXNDC2Q86VQ3 553 aa11.22□□□□□ -0.61
SPG11-213ENST00000558988 PIK3C2BO00750 1634 aa11.21□□□□□ -0.61
SPG11-213ENST00000558988 CPS1P31327 1500 aa11.21□□□□□ -0.61
SPG11-213ENST00000558988 DYRK3O43781 588 aa11.21□□□□□ -0.61
SPG11-213ENST00000558988 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
SPG11-213ENST00000558988 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
SPG11-213ENST00000558988 ARHGAP31Q2M1Z3 1444 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 LTKP29376 864 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 PPP2R2DQ66LE6 453 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 BCANQ96GW7 911 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 EID1Q9Y6B2 187 aa11.2□□□□□ -0.62
SPG11-213ENST00000558988 MED14O60244 1454 aa11.19□□□□□ -0.62
SPG11-213ENST00000558988 ADGRL2O95490 1459 aa11.19□□□□□ -0.62
SPG11-213ENST00000558988 TOM1O60784 492 aa11.19□□□□□ -0.62
SPG11-213ENST00000558988 CTBSQ01459 385 aa11.19□□□□□ -0.62
SPG11-213ENST00000558988 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
SPG11-213ENST00000558988 IDI1Q13907 227 aa11.18□□□□□ -0.62
SPG11-213ENST00000558988 PRSS36Q5K4E3 855 aa11.18□□□□□ -0.62
SPG11-213ENST00000558988 RNF135Q8IUD6 432 aa11.18□□□□□ -0.62
SPG11-213ENST00000558988 EFCAB6Q5THR3 1501 aa11.18□□□□□ -0.62
SPG11-213ENST00000558988 SYNMO15061 1565 aa11.17□□□□□ -0.62
SPG11-213ENST00000558988 SEPT12Q8IYM1 358 aa11.17□□□□□ -0.62
SPG11-213ENST00000558988 TRIM52Q96A61 297 aa11.17□□□□□ -0.62
SPG11-213ENST00000558988 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
SPG11-213ENST00000558988 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
SPG11-213ENST00000558988 HSPA1LP34931 641 aa11.16□□□□□ -0.62
SPG11-213ENST00000558988 CLN3Q13286 438 aa11.16□□□□□ -0.62
SPG11-213ENST00000558988 ABHD17AQ96GS6 310 aa11.16□□□□□ -0.62
SPG11-213ENST00000558988 ATXN7L1Q9ULK2 861 aaPredicted RBP11.16□□□□□ -0.62
SPG11-213ENST00000558988 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
SPG11-213ENST00000558988 SLIT1O75093 1534 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 ARHGAP23Q9P227 1491 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 FGFR3P22607 806 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 CHSY3Q70JA7 882 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 ILDR2Q71H61 639 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 TRIM11Q96F44 468 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 SLC26A8Q96RN1 970 aa11.15□□□□□ -0.62
SPG11-213ENST00000558988 PPP1R15AO75807 674 aaPredicted RBP11.14□□□□□ -0.63
SPG11-213ENST00000558988 SPATA31C1P0DKV0 1188 aa11.14□□□□□ -0.63
SPG11-213ENST00000558988 PLVAPQ9BX97 442 aa11.14□□□□□ -0.63
SPG11-213ENST00000558988 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
SPG11-213ENST00000558988 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
SPG11-213ENST00000558988 NOS1P29475 1434 aa11.13□□□□□ -0.63
SPG11-213ENST00000558988 ZMYND10O75800 440 aa11.13□□□□□ -0.63
SPG11-213ENST00000558988 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
SPG11-213ENST00000558988 LCE1DQ5T752 114 aa11.13□□□□□ -0.63
SPG11-213ENST00000558988 TET3O43151 1660 aa11.13□□□□□ -0.63
SPG11-213ENST00000558988 ARAFP10398 606 aa11.12□□□□□ -0.63
SPG11-213ENST00000558988 PHKA2P46019 1235 aa11.12□□□□□ -0.63
SPG11-213ENST00000558988 LRP8Q14114 963 aa11.12□□□□□ -0.63
SPG11-213ENST00000558988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPG11-213ENST00000558988 NUP155O75694 1391 aa11.12□□□□□ -0.63
SPG11-213ENST00000558988 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
SPG11-213ENST00000558988 UNC13BO14795 1591 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 BNIP3LO60238 219 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
SPG11-213ENST00000558988 RUBCNLQ9H714 662 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 NDFIP2Q9NV92 336 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 SLC52A1Q9NWF4 448 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 ROCK1Q13464 1354 aa11.11□□□□□ -0.63
SPG11-213ENST00000558988 LBRQ14739 615 aaKnown RBP11.1□□□□□ -0.63
SPG11-213ENST00000558988 RPRD2Q5VT52 1461 aaKnown RBP11.1□□□□□ -0.63
SPG11-213ENST00000558988 E9PCH4 1651 aa11.1□□□□□ -0.63
SPG11-213ENST00000558988 ALKQ9UM73 1620 aa11.09□□□□□ -0.63
SPG11-213ENST00000558988 A0A1B0GTH6 734 aa11.09□□□□□ -0.63
SPG11-213ENST00000558988 HYAL3O43820 417 aaPredicted RBP11.09□□□□□ -0.63
SPG11-213ENST00000558988 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
SPG11-213ENST00000558988 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
SPG11-213ENST00000558988 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms