RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 NPHP1O15259 732 aa30.55■■■□□ 2.48
RCCD1-206ENST00000556618 CWC25Q9NXE8 425 aaPredicted RBP30.55■■■□□ 2.48
RCCD1-206ENST00000556618 C10orf71Q711Q0 1435 aa30.54■■■□□ 2.48
RCCD1-206ENST00000556618 CCDC24Q8N4L8 307 aa30.54■■■□□ 2.48
RCCD1-206ENST00000556618 GTF2E1P29083 439 aaPredicted RBP30.54■■■□□ 2.48
RCCD1-206ENST00000556618 ATF7IPQ6VMQ6 1270 aa30.54■■■□□ 2.48
RCCD1-206ENST00000556618 NUTM1Q86Y26 1132 aa30.54■■■□□ 2.48
RCCD1-206ENST00000556618 TRMT112Q9UI30 125 aaKnown RBP30.54■■■□□ 2.48
RCCD1-206ENST00000556618 ZKSCAN2Q63HK3 967 aa30.53■■■□□ 2.48
RCCD1-206ENST00000556618 ANKRD31Q8N7Z5 1873 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 RNF123Q5XPI4 1314 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 TRIM27P14373 513 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 ST5P78524 1137 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 ERFEQ4G0M1 354 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 KLHL34Q8N239 644 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 FHDC1Q9C0D6 1143 aaPredicted RBP30.52■■■□□ 2.48
RCCD1-206ENST00000556618 CD2APQ9Y5K6 639 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 PXDNLA1KZ92 1463 aa30.52■■■□□ 2.48
RCCD1-206ENST00000556618 SRCIN1Q9C0H9 1055 aa30.51■■■□□ 2.47
RCCD1-206ENST00000556618 GCKRQ14397 625 aa30.5■■■□□ 2.47
RCCD1-206ENST00000556618 SYNE4Q8N205 404 aa30.49■■■□□ 2.47
RCCD1-206ENST00000556618 FAM89AQ96GI7 184 aa30.49■■■□□ 2.47
RCCD1-206ENST00000556618 BRIP1Q9BX63 1249 aa30.49■■■□□ 2.47
RCCD1-206ENST00000556618 TNNQ9UQP3 1299 aa30.49■■■□□ 2.47
RCCD1-206ENST00000556618 N4BP2Q86UW6 1770 aaPredicted RBP30.49■■■□□ 2.47
RCCD1-206ENST00000556618 SH3TC1Q8TE82 1336 aa30.49■■■□□ 2.47
RCCD1-206ENST00000556618 ALDH1L1O75891 902 aa30.49■■■□□ 2.47
RCCD1-206ENST00000556618 ZBTB38Q8NAP3 1195 aaPredicted RBP30.49■■■□□ 2.47
RCCD1-206ENST00000556618 PCCAP05165 728 aaPredicted RBP30.48■■■□□ 2.47
RCCD1-206ENST00000556618 ABCC12Q96J65 1359 aa30.48■■■□□ 2.47
RCCD1-206ENST00000556618 ABCC4O15439 1325 aa30.47■■■□□ 2.47
RCCD1-206ENST00000556618 SLC10A5Q5PT55 438 aa30.47■■■□□ 2.47
RCCD1-206ENST00000556618 SYT17Q9BSW7 474 aa30.47■■■□□ 2.47
RCCD1-206ENST00000556618 RTL5Q5HYW3 569 aaPredicted RBP30.46■■■□□ 2.47
RCCD1-206ENST00000556618 CLUAP1Q96AJ1 413 aa30.46■■■□□ 2.47
RCCD1-206ENST00000556618 CCT4P50991 539 aaKnown RBP30.45■■■□□ 2.47
RCCD1-206ENST00000556618 JARID2Q92833 1246 aaPredicted RBP30.45■■■□□ 2.47
RCCD1-206ENST00000556618 H7C1W4 665 aa30.45■■■□□ 2.46
RCCD1-206ENST00000556618 KIAA1551Q9HCM1 1747 aa30.44■■■□□ 2.46
RCCD1-206ENST00000556618 PDE6BP35913 854 aa30.44■■■□□ 2.46
RCCD1-206ENST00000556618 TGFB2P61812 414 aa30.44■■■□□ 2.46
RCCD1-206ENST00000556618 DDX60Q8IY21 1712 aaKnown RBP30.44■■■□□ 2.46
RCCD1-206ENST00000556618 RIC1Q4ADV7 1423 aa30.44■■■□□ 2.46
RCCD1-206ENST00000556618 INTS3Q68E01 1043 aaKnown RBP30.43■■■□□ 2.46
RCCD1-206ENST00000556618 NLGN2Q8NFZ4 835 aa30.43■■■□□ 2.46
RCCD1-206ENST00000556618 TNRC6CQ9HCJ0 1690 aaKnown RBP30.42■■■□□ 2.46
RCCD1-206ENST00000556618 PLIN1O60240 522 aa30.42■■■□□ 2.46
RCCD1-206ENST00000556618 HCLS1P14317 486 aaPredicted RBP30.42■■■□□ 2.46
RCCD1-206ENST00000556618 DZIP1LQ8IYY4 767 aaKnown RBP30.42■■■□□ 2.46
RCCD1-206ENST00000556618 IRS4O14654 1257 aaPredicted RBP30.41■■■□□ 2.46
RCCD1-206ENST00000556618 UBE3BQ7Z3V4 1068 aa30.41■■■□□ 2.46
RCCD1-206ENST00000556618 LAMB2P55268 1798 aa30.41■■■□□ 2.46
RCCD1-206ENST00000556618 CDHR2Q9BYE9 1310 aa30.41■■■□□ 2.46
RCCD1-206ENST00000556618 KLRG2A4D1S0 409 aaPredicted RBP30.41■■■□□ 2.46
RCCD1-206ENST00000556618 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.41■■■□□ 2.46
RCCD1-206ENST00000556618 C9orf78Q9NZ63 289 aaPredicted RBP30.41■■■□□ 2.46
RCCD1-206ENST00000556618 A0A0G2JLW4 131 aa30.4■■■□□ 2.46
RCCD1-206ENST00000556618 GRM8O00222 908 aa30.4■■■□□ 2.46
RCCD1-206ENST00000556618 CASP7P55210 303 aa30.4■■■□□ 2.46
RCCD1-206ENST00000556618 FTSJ3Q8IY81 847 aaKnown RBP30.4■■■□□ 2.46
RCCD1-206ENST00000556618 GOLGB1Q14789 3259 aaKnown RBP30.39■■■□□ 2.46
RCCD1-206ENST00000556618 RLBP1P12271 317 aa30.39■■■□□ 2.46
RCCD1-206ENST00000556618 DPEP1P16444 411 aa30.39■■■□□ 2.46
RCCD1-206ENST00000556618 CHRNA5P30532 468 aa30.39■■■□□ 2.46
RCCD1-206ENST00000556618 C2CD5Q86YS7 1000 aa30.39■■■□□ 2.46
RCCD1-206ENST00000556618 NLRP3Q96P20 1036 aa30.39■■■□□ 2.46
RCCD1-206ENST00000556618 PDZRN3Q9UPQ7 1066 aa30.39■■■□□ 2.46
RCCD1-206ENST00000556618 COL11A2P13942 1736 aaPredicted RBP30.38■■■□□ 2.45
RCCD1-206ENST00000556618 H0YIN7 160 aa30.38■■■□□ 2.45
RCCD1-206ENST00000556618 C3orf67Q6ZVT6 689 aa30.38■■■□□ 2.45
RCCD1-206ENST00000556618 TMEM57Q8N5G2 664 aa30.38■■■□□ 2.45
RCCD1-206ENST00000556618 USP44Q9H0E7 712 aa30.38■■■□□ 2.45
RCCD1-206ENST00000556618 MYH3P11055 1940 aa30.38■■■□□ 2.45
RCCD1-206ENST00000556618 MS4A1P11836 297 aa30.37■■■□□ 2.45
RCCD1-206ENST00000556618 HSP90B1P14625 803 aaKnown RBP30.37■■■□□ 2.45
RCCD1-206ENST00000556618 DLEC1Q9Y238 1755 aa30.37■■■□□ 2.45
RCCD1-206ENST00000556618 KCNA3P22001 575 aa30.37■■■□□ 2.45
RCCD1-206ENST00000556618 UTYO14607 1347 aa30.36■■■□□ 2.45
RCCD1-206ENST00000556618 NBPF7P0C2Y1 421 aaPredicted RBP30.36■■■□□ 2.45
RCCD1-206ENST00000556618 SRGNP10124 158 aa30.36■■■□□ 2.45
RCCD1-206ENST00000556618 CRY2Q49AN0 593 aa30.36■■■□□ 2.45
RCCD1-206ENST00000556618 PANK1Q8TE04 598 aa30.36■■■□□ 2.45
RCCD1-206ENST00000556618 BRCA1P38398 1863 aaKnown RBP30.35■■■□□ 2.45
RCCD1-206ENST00000556618 PDE8AO60658 829 aa30.35■■■□□ 2.45
RCCD1-206ENST00000556618 PLA2G12BQ9BX93 195 aa30.33■■■□□ 2.45
RCCD1-206ENST00000556618 RRP1P56182 461 aaKnown RBP30.32■■■□□ 2.45
RCCD1-206ENST00000556618 PDE3AQ14432 1141 aa30.32■■■□□ 2.44
RCCD1-206ENST00000556618 SF3B3Q15393 1217 aaKnown RBP30.32■■■□□ 2.44
RCCD1-206ENST00000556618 MASTLQ96GX5 879 aa30.32■■■□□ 2.44
RCCD1-206ENST00000556618 NPR1P16066 1061 aa30.31■■■□□ 2.44
RCCD1-206ENST00000556618 ZNF622Q969S3 477 aaKnown RBP eCLIP30.31■■■□□ 2.449e-8■□□□□ 11
RCCD1-206ENST00000556618 STYK1Q6J9G0 422 aa30.3■■■□□ 2.44
RCCD1-206ENST00000556618 PIM2Q9P1W9 311 aa30.3■■■□□ 2.44
RCCD1-206ENST00000556618 C20orf194Q5TEA3 1177 aa30.29■■■□□ 2.44
RCCD1-206ENST00000556618 ITPRIPQ8IWB1 547 aa30.29■■■□□ 2.44
RCCD1-206ENST00000556618 RPGRQ92834 1020 aaKnown RBP30.29■■■□□ 2.44
RCCD1-206ENST00000556618 CACNA1SQ13698 1873 aa30.29■■■□□ 2.44
RCCD1-206ENST00000556618 HOXA10P31260 410 aaPredicted RBP30.28■■■□□ 2.44
RCCD1-206ENST00000556618 CTSWP56202 376 aa30.28■■■□□ 2.44
RCCD1-206ENST00000556618 SUCLG2Q96I99 432 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms