RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 BRPF1P55201 1214 aaPredicted RBP16.72■□□□□ 0.27
SRSF5-214ENST00000556436 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
SRSF5-214ENST00000556436 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
SRSF5-214ENST00000556436 SYNE4Q8N205 404 aa16.72■□□□□ 0.27
SRSF5-214ENST00000556436 PTPRCP08575 1304 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 NPHP1O15259 732 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 CHRNA5P30532 468 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 ST5P78524 1137 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
SRSF5-214ENST00000556436 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
SRSF5-214ENST00000556436 NOB1Q9ULX3 412 aaKnown RBP16.71■□□□□ 0.27
SRSF5-214ENST00000556436 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 DPEP1P16444 411 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 C3orf67Q6ZVT6 689 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 BRIP1Q9BX63 1249 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 WWC3Q9ULE0 1092 aa16.7■□□□□ 0.26
SRSF5-214ENST00000556436 KCNA3P22001 575 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 NEXNQ0ZGT2 675 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
SRSF5-214ENST00000556436 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 CCDC191Q8NCU4 936 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
SRSF5-214ENST00000556436 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
SRSF5-214ENST00000556436 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
SRSF5-214ENST00000556436 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 KIF16BQ96L93 1317 aa16.69■□□□□ 0.26
SRSF5-214ENST00000556436 GTF2E1P29083 439 aaPredicted RBP16.68■□□□□ 0.26
SRSF5-214ENST00000556436 TGFB2P61812 414 aa16.68■□□□□ 0.26
SRSF5-214ENST00000556436 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
SRSF5-214ENST00000556436 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
SRSF5-214ENST00000556436 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
SRSF5-214ENST00000556436 UTRNP46939 3433 aa16.67■□□□□ 0.26
SRSF5-214ENST00000556436 MYH3P11055 1940 aa16.67■□□□□ 0.26
SRSF5-214ENST00000556436 COL4A1P02462 1669 aa16.67■□□□□ 0.26
SRSF5-214ENST00000556436 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
SRSF5-214ENST00000556436 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
SRSF5-214ENST00000556436 ARFGEF1Q9Y6D6 1849 aa16.66■□□□□ 0.26
SRSF5-214ENST00000556436 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
SRSF5-214ENST00000556436 TAF1P21675 1872 aa16.66■□□□□ 0.26
SRSF5-214ENST00000556436 GCKRQ14397 625 aa16.66■□□□□ 0.26
SRSF5-214ENST00000556436 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
SRSF5-214ENST00000556436 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
SRSF5-214ENST00000556436 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
SRSF5-214ENST00000556436 PDE6BP35913 854 aa16.65■□□□□ 0.26
SRSF5-214ENST00000556436 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
SRSF5-214ENST00000556436 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
SRSF5-214ENST00000556436 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
SRSF5-214ENST00000556436 ABCC4O15439 1325 aa16.65■□□□□ 0.26
SRSF5-214ENST00000556436 SRGNP10124 158 aa16.64■□□□□ 0.25
SRSF5-214ENST00000556436 TRIM27P14373 513 aa16.64■□□□□ 0.25
SRSF5-214ENST00000556436 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRSF5-214ENST00000556436 CASP7P55210 303 aa16.64■□□□□ 0.25
SRSF5-214ENST00000556436 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
SRSF5-214ENST00000556436 API5Q9BZZ5 524 aaKnown RBP16.64■□□□□ 0.25
SRSF5-214ENST00000556436 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
SRSF5-214ENST00000556436 H0YIN7 160 aa16.63■□□□□ 0.25
SRSF5-214ENST00000556436 H7C1W4 665 aa16.63■□□□□ 0.25
SRSF5-214ENST00000556436 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
SRSF5-214ENST00000556436 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
SRSF5-214ENST00000556436 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
SRSF5-214ENST00000556436 CDHR2Q9BYE9 1310 aa16.63■□□□□ 0.25
SRSF5-214ENST00000556436 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
SRSF5-214ENST00000556436 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
SRSF5-214ENST00000556436 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
SRSF5-214ENST00000556436 ZKSCAN2Q63HK3 967 aa16.61■□□□□ 0.25
SRSF5-214ENST00000556436 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
SRSF5-214ENST00000556436 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
SRSF5-214ENST00000556436 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.252e-8■□□□□ 11.3
SRSF5-214ENST00000556436 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
SRSF5-214ENST00000556436 MASTLQ96GX5 879 aa16.61■□□□□ 0.25
SRSF5-214ENST00000556436 GRM8O00222 908 aa16.6■□□□□ 0.25
SRSF5-214ENST00000556436 RLBP1P12271 317 aa16.6■□□□□ 0.25
SRSF5-214ENST00000556436 NPR1P16066 1061 aa16.6■□□□□ 0.25
SRSF5-214ENST00000556436 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
SRSF5-214ENST00000556436 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
SRSF5-214ENST00000556436 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
SRSF5-214ENST00000556436 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
SRSF5-214ENST00000556436 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
SRSF5-214ENST00000556436 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
SRSF5-214ENST00000556436 PLIN1O60240 522 aa16.58■□□□□ 0.24
SRSF5-214ENST00000556436 PDE8AO60658 829 aa16.58■□□□□ 0.24
SRSF5-214ENST00000556436 NBPF7P0C2Y1 421 aaPredicted RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 SF3B3Q15393 1217 aaKnown RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 PRPF40BQ6NWY9 871 aaKnown RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
SRSF5-214ENST00000556436 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
SRSF5-214ENST00000556436 UTYO14607 1347 aa16.58■□□□□ 0.24
SRSF5-214ENST00000556436 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
SRSF5-214ENST00000556436 CTSWP56202 376 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms