RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 IFT172Q9UG01 1749 aa8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 NRXN3Q9Y4C0 1643 aa8.16□□□□□ -1.1
SMARCC2-213ENST00000552627 H3BM21 787 aa8.15□□□□□ -1.1
SMARCC2-213ENST00000552627 SKIP12755 728 aa8.15□□□□□ -1.1
SMARCC2-213ENST00000552627 PTSQ03393 145 aa8.15□□□□□ -1.1
SMARCC2-213ENST00000552627 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
SMARCC2-213ENST00000552627 NFATC2IPQ8NCF5 419 aa8.15□□□□□ -1.1
SMARCC2-213ENST00000552627 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
SMARCC2-213ENST00000552627 SPATA31E1Q6ZUB1 1445 aa8.14□□□□□ -1.11
SMARCC2-213ENST00000552627 PLEKHG1Q9ULL1 1385 aa8.14□□□□□ -1.11
SMARCC2-213ENST00000552627 GPC1P35052 558 aa8.14□□□□□ -1.11
SMARCC2-213ENST00000552627 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
SMARCC2-213ENST00000552627 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
SMARCC2-213ENST00000552627 RAB6BQ9NRW1 208 aa8.14□□□□□ -1.11
SMARCC2-213ENST00000552627 ADAMTS13Q76LX8 1427 aa8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 ANKRD30BQ9BXX2 1392 aa8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 RGL3Q3MIN7 710 aa8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 SLC27A3Q5K4L6 730 aa8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 SETBP1Q9Y6X0 1596 aa8.13□□□□□ -1.11
SMARCC2-213ENST00000552627 SETD1AO15047 1707 aaKnown RBP8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 ACIN1Q9UKV3 1341 aaKnown RBP8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 ESCO1Q5FWF5 840 aa8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 IRF7Q92985 503 aa8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 CNKSR1Q969H4 720 aa8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 ESYT1Q9BSJ8 1104 aa8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 NWD1Q149M9 1564 aa8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 CHD2O14647 1828 aaKnown RBP8.12□□□□□ -1.11
SMARCC2-213ENST00000552627 DIP2AQ14689 1571 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 IL2RAP01589 272 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 EML3Q32P44 896 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 CCDC155Q8N6L0 562 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 GLMNQ92990 594 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 PCGF6Q9BYE7 350 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 GRIP2Q9C0E4 1043 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 CPS1P31327 1500 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 LRRC7Q96NW7 1537 aa8.11□□□□□ -1.11
SMARCC2-213ENST00000552627 DHX57Q6P158 1386 aaKnown RBP8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 SLC35F4A4IF30 521 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 USP17L5A8MUK1 530 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 CENPCQ03188 943 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 NCOA4Q13772 614 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 ETNK1Q9HBU6 452 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 NOD1Q9Y239 953 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 PTPRUQ92729 1446 aa8.1□□□□□ -1.11
SMARCC2-213ENST00000552627 XRN1Q8IZH2 1706 aaKnown RBP8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 ADGRF5Q8IZF2 1346 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 RHOQP17081 205 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 DEPDC4Q8N2C3 294 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 CALR3Q96L12 384 aaKnown RBP8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 UCN2Q96RP3 112 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 ALKQ9UM73 1620 aa8.09□□□□□ -1.11
SMARCC2-213ENST00000552627 METP08581 1390 aa8.09□□□□□ -1.12
SMARCC2-213ENST00000552627 ASXL1Q8IXJ9 1541 aa8.08□□□□□ -1.12
SMARCC2-213ENST00000552627 STAU1O95793 577 aaKnown RBP8.08□□□□□ -1.12
SMARCC2-213ENST00000552627 POU4F2Q12837 409 aa8.08□□□□□ -1.12
SMARCC2-213ENST00000552627 SIN3AQ96ST3 1273 aa8.08□□□□□ -1.12
SMARCC2-213ENST00000552627 PCDHGA11Q9Y5H2 935 aa8.08□□□□□ -1.12
SMARCC2-213ENST00000552627 HRH3Q9Y5N1 445 aa8.08□□□□□ -1.12
SMARCC2-213ENST00000552627 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 RPGRIP1LQ68CZ1 1315 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 ATP9BO43861 1147 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 INHAP05111 366 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 KCNA6P17658 529 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 ZSCAN10Q96SZ4 725 aaPredicted RBP8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 TBX22Q9Y458 520 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 TMEM94Q12767 1356 aa8.07□□□□□ -1.12
SMARCC2-213ENST00000552627 NKTRP30414 1462 aaKnown RBP8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 MYOM2P54296 1465 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 PIK3C2GO75747 1445 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 USP17L3A6NCW0 530 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 USP17L4A6NCW7 530 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 ITGA6P23229 1130 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 GMPRP36959 345 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 SCNN1DP51172 638 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 GDF10P55107 478 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 GTF2IP78347 998 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 FBXO41Q8TF61 875 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 NRXN1Q9ULB1 1477 aa8.06□□□□□ -1.12
SMARCC2-213ENST00000552627 LAMC1P11047 1609 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms