RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
LETMD1-228ENST00000550929 TAOK3Q9H2K8 898 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
LETMD1-228ENST00000550929 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-228ENST00000550929 ANXA1P04083 346 aa11.91□□□□□ -0.5
LETMD1-228ENST00000550929 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
LETMD1-228ENST00000550929 SMC1BQ8NDV3 1235 aa11.91□□□□□ -0.5
LETMD1-228ENST00000550929 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
LETMD1-228ENST00000550929 BCORQ6W2J9 1755 aa11.9□□□□□ -0.5
LETMD1-228ENST00000550929 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
LETMD1-228ENST00000550929 CCDC93Q567U6 631 aa11.9□□□□□ -0.5
LETMD1-228ENST00000550929 SUSD4Q5VX71 490 aa11.9□□□□□ -0.5
LETMD1-228ENST00000550929 C7orf43Q8WVR3 580 aa11.9□□□□□ -0.5
LETMD1-228ENST00000550929 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
LETMD1-228ENST00000550929 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
LETMD1-228ENST00000550929 SLX4Q8IY92 1834 aa11.89□□□□□ -0.51
LETMD1-228ENST00000550929 KLRG2A4D1S0 409 aaPredicted RBP11.89□□□□□ -0.51
LETMD1-228ENST00000550929 ERVV-1B6SEH8 477 aa11.89□□□□□ -0.51
LETMD1-228ENST00000550929 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
LETMD1-228ENST00000550929 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 ABCC12Q96J65 1359 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
LETMD1-228ENST00000550929 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 SOGA3Q5TF21 947 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
LETMD1-228ENST00000550929 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
LETMD1-228ENST00000550929 RGL2O15211 777 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
LETMD1-228ENST00000550929 AIMP1Q12904 312 aaKnown RBP11.87□□□□□ -0.51
LETMD1-228ENST00000550929 PDIA6Q15084 440 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 CCDC88AQ3V6T2 1871 aa11.87□□□□□ -0.51
LETMD1-228ENST00000550929 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
LETMD1-228ENST00000550929 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
LETMD1-228ENST00000550929 CACNA1SQ13698 1873 aa11.86□□□□□ -0.51
LETMD1-228ENST00000550929 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
LETMD1-228ENST00000550929 WDR43Q15061 677 aaKnown RBP eCLIP11.86□□□□□ -0.51
LETMD1-228ENST00000550929 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
LETMD1-228ENST00000550929 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
LETMD1-228ENST00000550929 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
LETMD1-228ENST00000550929 ZNF34Q8IZ26 560 aa11.86□□□□□ -0.51
LETMD1-228ENST00000550929 TNRC6CQ9HCJ0 1690 aaKnown RBP11.86□□□□□ -0.51
LETMD1-228ENST00000550929 NTSR2O95665 410 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 IFFO2Q5TF58 517 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 LRP10Q7Z4F1 713 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 RTKN2Q8IZC4 609 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 RPGRQ92834 1020 aaKnown RBP11.85□□□□□ -0.51
LETMD1-228ENST00000550929 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
LETMD1-228ENST00000550929 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 FER1L6Q2WGJ9 1857 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 RUNDC1Q96C34 613 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 WDR90Q96KV7 1748 aa11.84□□□□□ -0.51
LETMD1-228ENST00000550929 IARSP41252 1262 aaKnown RBP11.83□□□□□ -0.52
LETMD1-228ENST00000550929 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
LETMD1-228ENST00000550929 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
LETMD1-228ENST00000550929 RBM17Q96I25 401 aaKnown RBP11.83□□□□□ -0.52
LETMD1-228ENST00000550929 CHL1O00533 1208 aa11.82□□□□□ -0.52
LETMD1-228ENST00000550929 EAPPQ56P03 285 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-228ENST00000550929 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
LETMD1-228ENST00000550929 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
LETMD1-228ENST00000550929 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-228ENST00000550929 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-228ENST00000550929 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
LETMD1-228ENST00000550929 NLRP3Q96P20 1036 aa11.81□□□□□ -0.52
LETMD1-228ENST00000550929 TAF1DQ9H5J8 278 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-228ENST00000550929 GJA3Q9Y6H8 435 aa11.81□□□□□ -0.52
LETMD1-228ENST00000550929 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
LETMD1-228ENST00000550929 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
LETMD1-228ENST00000550929 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 PRKRIP1Q9H875 184 aaPredicted RBP11.8□□□□□ -0.52
LETMD1-228ENST00000550929 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
LETMD1-228ENST00000550929 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
LETMD1-228ENST00000550929 NUP98P52948 1817 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 ARFGEF2Q9Y6D5 1785 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 RNF123Q5XPI4 1314 aa11.8□□□□□ -0.52
LETMD1-228ENST00000550929 IQCA1LA6NCM1 817 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 FZD9O00144 591 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
LETMD1-228ENST00000550929 JDP2Q8WYK2 163 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms