RNA–Protein interactions for RNA: ENST00000549415.1

USP15-214, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-214ENST00000549415 FIGNL2A6NMB9 653 aa9.17□□□□□ -0.94
USP15-214ENST00000549415 TTLL8A6PVC2 850 aa9.17□□□□□ -0.94
USP15-214ENST00000549415 SPINT1O43278 529 aa9.17□□□□□ -0.94
USP15-214ENST00000549415 LILRA1O75019 489 aa9.17□□□□□ -0.94
USP15-214ENST00000549415 ADD1P35611 737 aaKnown RBP9.17□□□□□ -0.94
USP15-214ENST00000549415 ESCO1Q5FWF5 840 aa9.17□□□□□ -0.94
USP15-214ENST00000549415 NDUFB9Q9Y6M9 179 aa9.17□□□□□ -0.94
USP15-214ENST00000549415 LAMC1P11047 1609 aa9.16□□□□□ -0.94
USP15-214ENST00000549415 HFM1A2PYH4 1435 aa9.16□□□□□ -0.94
USP15-214ENST00000549415 GMPRP36959 345 aa9.16□□□□□ -0.94
USP15-214ENST00000549415 NR1H3Q13133 447 aa9.16□□□□□ -0.94
USP15-214ENST00000549415 RGL3Q3MIN7 710 aa9.16□□□□□ -0.94
USP15-214ENST00000549415 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
USP15-214ENST00000549415 ATAD2Q6PL18 1390 aa9.15□□□□□ -0.94
USP15-214ENST00000549415 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
USP15-214ENST00000549415 IRF7Q92985 503 aa9.15□□□□□ -0.94
USP15-214ENST00000549415 INSM2Q96T92 566 aaPredicted RBP9.15□□□□□ -0.94
USP15-214ENST00000549415 ZNF395Q9H8N7 513 aaPredicted RBP9.15□□□□□ -0.94
USP15-214ENST00000549415 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
USP15-214ENST00000549415 TRPC5Q9UL62 973 aaPredicted RBP9.15□□□□□ -0.94
USP15-214ENST00000549415 COL22A1Q8NFW1 1626 aaPredicted RBP9.15□□□□□ -0.94
USP15-214ENST00000549415 RPGRIP1LQ68CZ1 1315 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 NPHP3Q7Z494 1330 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 FOXO3O43524 673 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 CTSOP43234 321 aaPredicted RBP9.14□□□□□ -0.95
USP15-214ENST00000549415 WAPLQ7Z5K2 1190 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 MYOM2P54296 1465 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 PXDNQ92626 1479 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 CCDC144AA2RUR9 1427 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 ATRNO75882 1429 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
USP15-214ENST00000549415 PLEKHH1Q9ULM0 1364 aa9.13□□□□□ -0.95
USP15-214ENST00000549415 PPFIA3O75145 1194 aa9.13□□□□□ -0.95
USP15-214ENST00000549415 ADH1AP07327 375 aa9.13□□□□□ -0.95
USP15-214ENST00000549415 TMEM132EQ6IEE7 984 aa9.13□□□□□ -0.95
USP15-214ENST00000549415 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
USP15-214ENST00000549415 MARF1Q9Y4F3 1742 aaKnown RBP9.13□□□□□ -0.95
USP15-214ENST00000549415 IFT172Q9UG01 1749 aa9.12□□□□□ -0.95
USP15-214ENST00000549415 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
USP15-214ENST00000549415 APBB1O00213 710 aa9.11□□□□□ -0.95
USP15-214ENST00000549415 PTSQ03393 145 aa9.11□□□□□ -0.95
USP15-214ENST00000549415 FNBP4Q8N3X1 1017 aaPredicted RBP9.11□□□□□ -0.95
USP15-214ENST00000549415 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
USP15-214ENST00000549415 KNDC1Q76NI1 1749 aa9.11□□□□□ -0.95
USP15-214ENST00000549415 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
USP15-214ENST00000549415 LRPPRCP42704 1394 aaKnown RBP9.11□□□□□ -0.95
USP15-214ENST00000549415 PTGIRP43119 386 aa9.1□□□□□ -0.95
USP15-214ENST00000549415 INSM1Q01101 510 aaPredicted RBP9.1□□□□□ -0.95
USP15-214ENST00000549415 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
USP15-214ENST00000549415 BCL9LQ86UU0 1499 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 TECPR2O15040 1411 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 PIK3C2GO75747 1445 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 SPATA31E1Q6ZUB1 1445 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 VSIG8P0DPA2 414 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 SAFB2Q14151 953 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP15-214ENST00000549415 RNF217Q8TC41 542 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 ANKRD30BQ9BXX2 1392 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 USP32Q8NFA0 1604 aa9.09□□□□□ -0.95
USP15-214ENST00000549415 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
USP15-214ENST00000549415 IRF5Q13568 498 aa9.08□□□□□ -0.96
USP15-214ENST00000549415 FOXD4L5Q5VV16 416 aaPredicted RBP9.08□□□□□ -0.96
USP15-214ENST00000549415 MPHOSPH9Q99550 1183 aa9.08□□□□□ -0.96
USP15-214ENST00000549415 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
USP15-214ENST00000549415 RALGAPBQ86X10 1494 aa9.08□□□□□ -0.96
USP15-214ENST00000549415 GLI3P10071 1580 aa9.07□□□□□ -0.96
USP15-214ENST00000549415 RGPD8O14715 1765 aaPredicted RBP9.07□□□□□ -0.96
USP15-214ENST00000549415 LORP23490 312 aaPredicted RBP9.07□□□□□ -0.96
USP15-214ENST00000549415 SCTRP47872 440 aa9.07□□□□□ -0.96
USP15-214ENST00000549415 KRT28Q7Z3Y7 464 aa9.07□□□□□ -0.96
USP15-214ENST00000549415 ZNF330Q9Y3S2 320 aaPredicted RBP9.07□□□□□ -0.96
USP15-214ENST00000549415 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.07□□□□□ -0.96
USP15-214ENST00000549415 SPATA31A3Q5VYP0 1347 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 TNS3Q68CZ2 1445 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
USP15-214ENST00000549415 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 ABCC11Q96J66 1382 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 PLCH1Q4KWH8 1693 aa9.06□□□□□ -0.96
USP15-214ENST00000549415 SLIT2O94813 1529 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 ABCA3Q99758 1704 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 CFAP70Q5T0N1 1121 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 PRAM1Q96QH2 718 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 GDPD2Q9HCC8 539 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 BRWD3Q6RI45 1802 aa9.05□□□□□ -0.96
USP15-214ENST00000549415 DEFB132Q7Z7B7 95 aa9.04□□□□□ -0.96
USP15-214ENST00000549415 PMFBP1Q8TBY8 1022 aa9.04□□□□□ -0.96
USP15-214ENST00000549415 CEP126Q9P2H0 1117 aa9.04□□□□□ -0.96
USP15-214ENST00000549415 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
USP15-214ENST00000549415 DHX57Q6P158 1386 aaKnown RBP9.03□□□□□ -0.96
USP15-214ENST00000549415 PSME1Q06323 249 aa9.03□□□□□ -0.96
USP15-214ENST00000549415 SF3B2Q13435 895 aaKnown RBP9.03□□□□□ -0.96
USP15-214ENST00000549415 CCDC125Q86Z20 511 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms