RNA–Protein interactions for RNA: ENST00000549223.1

AC079950.1-202, humanhuman

TSL 3

Gene AC079950.1, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079950.1-202ENST00000549223 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.48□□□□□ -1.05
AC079950.1-202ENST00000549223 LAS1LQ9Y4W2 734 aaKnown RBP8.48□□□□□ -1.05
AC079950.1-202ENST00000549223 C5P01031 1676 aa8.48□□□□□ -1.05
AC079950.1-202ENST00000549223 LY75O60449 1722 aa8.48□□□□□ -1.05
AC079950.1-202ENST00000549223 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
AC079950.1-202ENST00000549223 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
AC079950.1-202ENST00000549223 LCE2BO14633 110 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 ZNF790Q6PG37 636 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 LRCH3Q96II8 777 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 CHMP4AQ9BY43 222 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 RGPD3A6NKT7 1758 aaPredicted RBP8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 RGPD4Q7Z3J3 1758 aa8.47□□□□□ -1.05
AC079950.1-202ENST00000549223 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 EXOSC9Q06265 439 aaKnown RBP8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 TTC5Q8N0Z6 440 aa8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 PIGBQ92521 554 aa8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 MIS18AQ9NYP9 233 aa8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 TNS1Q9HBL0 1735 aaKnown RBP8.46□□□□□ -1.06
AC079950.1-202ENST00000549223 TWISTNBQ3B726 338 aaPredicted RBP8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 C8orf58Q8NAV2 365 aa8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 FMNL2Q96PY5 1086 aa8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 COL5A3P25940 1745 aaPredicted RBP8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 TJP1Q07157 1748 aa8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 EP400Q96L91 3159 aa8.45□□□□□ -1.06
AC079950.1-202ENST00000549223 RREB1Q92766 1687 aa8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 VAMP4O75379 141 aa8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 ALDH1L2Q3SY69 923 aa8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 SYTL4Q96C24 671 aaPredicted RBP8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 ATG3Q9NT62 314 aa8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 RCAN3Q9UKA8 241 aa8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 TAF1LQ8IZX4 1826 aa8.44□□□□□ -1.06
AC079950.1-202ENST00000549223 DPYSL4O14531 572 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 KCNQ3O43525 872 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 SNRPA1P09661 255 aaKnown RBP8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 SLC39A6Q13433 755 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 TSPYL6Q8N831 410 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 ACSBG1Q96GR2 724 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 ZNF496Q96IT1 587 aaPredicted RBP8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 ASAP1Q9ULH1 1129 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
AC079950.1-202ENST00000549223 KCNQ2O43526 872 aa8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 RARSP54136 660 aaKnown RBP8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 KRT24Q2M2I5 525 aa8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 CCDC30Q5VVM6 783 aa8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 TEX13AQ9BXU3 409 aaPredicted RBP8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 ERBB4Q15303 1308 aa8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 N4BP2Q86UW6 1770 aaPredicted RBP8.42□□□□□ -1.06
AC079950.1-202ENST00000549223 RNF123Q5XPI4 1314 aa8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 KIF16BQ96L93 1317 aa8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 E2F4Q16254 413 aa8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 TSKSQ9UJT2 592 aa8.41□□□□□ -1.06
AC079950.1-202ENST00000549223 LOC102724428A0A0B4J2F2 783 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 ELL2O00472 640 aaPredicted RBP8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 GFRA3O60609 400 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 SIK1P57059 783 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 EN1Q05925 392 aaPredicted RBP8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 HDGFL1Q5TGJ6 251 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 PACS2Q86VP3 889 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 SSH1Q8WYL5 1049 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 STK31Q9BXU1 1019 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 SMC4Q9NTJ3 1288 aa8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 DBF4Q9UBU7 674 aaPredicted RBP8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 MYH14Q7Z406 1995 aaKnown RBP8.4□□□□□ -1.06
AC079950.1-202ENST00000549223 PTPRCP08575 1304 aa8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 PTCD1O75127 700 aaKnown RBP8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 TRIM37O94972 964 aa8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 STARD3NLO95772 234 aa8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 DDX12PQ92771 950 aa8.39□□□□□ -1.07
AC079950.1-202ENST00000549223 C4BP0C0L5 1744 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 PLSCR1O15162 318 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 IPO8O15397 1037 aaKnown RBP8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 BCAR3O75815 825 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 RRP1P56182 461 aaKnown RBP8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 PPP4CP60510 307 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 ARHGAP45Q92619 1136 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 DDX21Q9NR30 783 aaKnown RBP eCLIP8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 HYPKQ9NX55 129 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
AC079950.1-202ENST00000549223 NUP188Q5SRE5 1749 aa8.37□□□□□ -1.07
AC079950.1-202ENST00000549223 CNTNAP4Q9C0A0 1308 aa8.37□□□□□ -1.07
AC079950.1-202ENST00000549223 UBR3Q6ZT12 1888 aa8.37□□□□□ -1.07
AC079950.1-202ENST00000549223 CYP19A1P11511 503 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms