RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ZCRB1Q8TBF4 217 aaKnown RBP9.81□□□□□ -0.84
LDHA-223ENST00000545215 PHOX2BQ99453 314 aa9.81□□□□□ -0.84
LDHA-223ENST00000545215 GPCPD1Q9NPB8 672 aa9.81□□□□□ -0.84
LDHA-223ENST00000545215 PCDHGA10Q9Y5H3 936 aa9.81□□□□□ -0.84
LDHA-223ENST00000545215 CACNA1AO00555 2505 aa9.8□□□□□ -0.84
LDHA-223ENST00000545215 H0YGN5 161 aa9.8□□□□□ -0.84
LDHA-223ENST00000545215 TRPA1O75762 1119 aa9.8□□□□□ -0.84
LDHA-223ENST00000545215 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
LDHA-223ENST00000545215 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
LDHA-223ENST00000545215 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.8□□□□□ -0.84
LDHA-223ENST00000545215 ANKRD24Q8TF21 1146 aa9.8□□□□□ -0.84
LDHA-223ENST00000545215 RNF186Q9NXI6 227 aa9.8□□□□□ -0.84
LDHA-223ENST00000545215 ADGRB1O14514 1584 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 NFAT5O94916 1531 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 TRPM7Q96QT4 1865 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 LTBP3Q9NS15 1303 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 A6NJR5 290 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 C7P10643 843 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 SLAIN1Q8ND83 568 aa9.79□□□□□ -0.84
LDHA-223ENST00000545215 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
LDHA-223ENST00000545215 LOC102724428A0A0B4J2F2 783 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 TRAF5O00463 557 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 SIK1P57059 783 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 DDR1Q08345 913 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 ITPK1Q13572 414 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
LDHA-223ENST00000545215 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 MPRIPQ6WCQ1 1025 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 STXBP5LQ9Y2K9 1186 aa9.78□□□□□ -0.84
LDHA-223ENST00000545215 APBB1O00213 710 aa9.77□□□□□ -0.85
LDHA-223ENST00000545215 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
LDHA-223ENST00000545215 RFC4P35249 363 aa9.77□□□□□ -0.85
LDHA-223ENST00000545215 FBXO46Q6PJ61 603 aaPredicted RBP9.77□□□□□ -0.85
LDHA-223ENST00000545215 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
LDHA-223ENST00000545215 DCBLD2Q96PD2 775 aa9.77□□□□□ -0.85
LDHA-223ENST00000545215 MAP2P11137 1827 aaKnown RBP9.76□□□□□ -0.85
LDHA-223ENST00000545215 SPTBN5Q9NRC6 3674 aaKnown RBP9.76□□□□□ -0.85
LDHA-223ENST00000545215 SKIV2LQ15477 1246 aaKnown RBP9.76□□□□□ -0.85
LDHA-223ENST00000545215 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
LDHA-223ENST00000545215 FBXW7Q969H0 707 aa9.76□□□□□ -0.85
LDHA-223ENST00000545215 ARID3AQ99856 593 aa9.76□□□□□ -0.85
LDHA-223ENST00000545215 RANBP2P49792 3224 aaKnown RBP9.75□□□□□ -0.85
LDHA-223ENST00000545215 FER1L6Q2WGJ9 1857 aa9.75□□□□□ -0.85
LDHA-223ENST00000545215 MCM6Q14566 821 aa9.75□□□□□ -0.85
LDHA-223ENST00000545215 INTS3Q68E01 1043 aaKnown RBP9.75□□□□□ -0.85
LDHA-223ENST00000545215 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
LDHA-223ENST00000545215 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 DLEC1Q9Y238 1755 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 POLRMTO00411 1230 aaKnown RBP9.74□□□□□ -0.85
LDHA-223ENST00000545215 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
LDHA-223ENST00000545215 SP7Q8TDD2 431 aaPredicted RBP9.74□□□□□ -0.85
LDHA-223ENST00000545215 CLUAP1Q96AJ1 413 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 TAOK3Q9H2K8 898 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 PRO3102Q9H379 93 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 FAM217BQ9NTX9 383 aaPredicted RBP9.74□□□□□ -0.85
LDHA-223ENST00000545215 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 HDAC9Q9UKV0 1011 aa9.74□□□□□ -0.85
LDHA-223ENST00000545215 VCANP13611 3396 aa9.73□□□□□ -0.85
LDHA-223ENST00000545215 SOX1O00570 391 aaPredicted RBP9.73□□□□□ -0.85
LDHA-223ENST00000545215 C21orf2O43822 256 aa9.73□□□□□ -0.85
LDHA-223ENST00000545215 TRAK2O60296 914 aa9.73□□□□□ -0.85
LDHA-223ENST00000545215 CELF2O95319 508 aaKnown RBP9.73□□□□□ -0.85
LDHA-223ENST00000545215 TM4SF1P30408 202 aa9.73□□□□□ -0.85
LDHA-223ENST00000545215 ATP6V1AP38606 617 aa9.73□□□□□ -0.85
LDHA-223ENST00000545215 SYNE4Q8N205 404 aa9.73□□□□□ -0.85
LDHA-223ENST00000545215 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
LDHA-223ENST00000545215 ZNF541Q9H0D2 1346 aa9.72□□□□□ -0.85
LDHA-223ENST00000545215 FAM155AB1AL88 458 aaPredicted RBP9.72□□□□□ -0.85
LDHA-223ENST00000545215 OATP04181 439 aa9.72□□□□□ -0.85
LDHA-223ENST00000545215 EN2P19622 333 aaPredicted RBP9.72□□□□□ -0.85
LDHA-223ENST00000545215 PIGBQ92521 554 aa9.72□□□□□ -0.85
LDHA-223ENST00000545215 LRCH3Q96II8 777 aa9.72□□□□□ -0.85
LDHA-223ENST00000545215 SMG6Q86US8 1419 aaKnown RBP9.71□□□□□ -0.85
LDHA-223ENST00000545215 PAPPA2Q9BXP8 1791 aa9.71□□□□□ -0.85
LDHA-223ENST00000545215 ITGAEP38570 1179 aa9.71□□□□□ -0.86
LDHA-223ENST00000545215 KIF23Q02241 960 aaPredicted RBP9.71□□□□□ -0.86
LDHA-223ENST00000545215 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
LDHA-223ENST00000545215 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.86
LDHA-223ENST00000545215 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
LDHA-223ENST00000545215 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
LDHA-223ENST00000545215 SCN11AQ9UI33 1791 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 H0YIN7 160 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 RPS6KA4O75676 772 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 FOSBP53539 338 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 GPR153Q6NV75 609 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 PADI6Q6TGC4 694 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
LDHA-223ENST00000545215 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 TTC13Q8NBP0 860 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 PXYLP1Q8TE99 480 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 CABP1Q9NZU7 370 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 USP31Q70CQ4 1352 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 LAMB4A4D0S4 1761 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 CEP290O15078 2479 aa9.7□□□□□ -0.86
LDHA-223ENST00000545215 TTC21BQ7Z4L5 1316 aa9.69□□□□□ -0.86
LDHA-223ENST00000545215 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
LDHA-223ENST00000545215 SRPK2P78362 688 aaKnown RBP9.69□□□□□ -0.86
LDHA-223ENST00000545215 DEFB123Q8N688 67 aa9.69□□□□□ -0.86
LDHA-223ENST00000545215 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms