RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
LDHA-221ENST00000543445 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
LDHA-221ENST00000543445 CXXC1Q9P0U4 656 aaPredicted RBP8.67□□□□□ -1.02
LDHA-221ENST00000543445 ABCC11Q96J66 1382 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 FOXO3O43524 673 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 DKK1O94907 266 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
LDHA-221ENST00000543445 PSME1Q06323 249 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 ESCO1Q5FWF5 840 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 TAS1R3Q7RTX0 852 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 STK26Q9P289 416 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 USP21Q9UK80 565 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 IFT172Q9UG01 1749 aa8.66□□□□□ -1.02
LDHA-221ENST00000543445 BCL9LQ86UU0 1499 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 ATRNO75882 1429 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 ANKRD30BQ9BXX2 1392 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 NPHP3Q7Z494 1330 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 MAGEB6P1A0A0J9YX57 407 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
LDHA-221ENST00000543445 CARD14Q9BXL6 1004 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
LDHA-221ENST00000543445 SRCAPQ6ZRS2 3230 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 H3BRB1 525 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 HRO43593 1189 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 LSM11P83369 360 aaKnown RBP eCLIP8.64□□□□□ -1.03
LDHA-221ENST00000543445 OCLNQ16625 522 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
LDHA-221ENST00000543445 TUT1Q9H6E5 874 aaKnown RBP8.64□□□□□ -1.03
LDHA-221ENST00000543445 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
LDHA-221ENST00000543445 ICMTO60725 284 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 COPS2P61201 443 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 USP4Q13107 963 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
LDHA-221ENST00000543445 AGERQ15109 404 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 NPAS4Q8IUM7 802 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 WNT2BQ93097 391 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 TRPC5Q9UL62 973 aaPredicted RBP8.63□□□□□ -1.03
LDHA-221ENST00000543445 NRXN1Q9ULB1 1477 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 KNDC1Q76NI1 1749 aa8.63□□□□□ -1.03
LDHA-221ENST00000543445 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
LDHA-221ENST00000543445 BPHLQ86WA6 291 aaPredicted RBP8.62□□□□□ -1.03
LDHA-221ENST00000543445 C14orf93Q9H972 538 aaKnown RBP8.62□□□□□ -1.03
LDHA-221ENST00000543445 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
LDHA-221ENST00000543445 EP400Q96L91 3159 aa8.62□□□□□ -1.03
LDHA-221ENST00000543445 SPATA31A3Q5VYP0 1347 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 FMN2Q9NZ56 1722 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 ST18O60284 1047 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 MAPK1P28482 360 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 OTUD5Q96G74 571 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
LDHA-221ENST00000543445 SLIT2O94813 1529 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 C21orf2O43822 256 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 TCF3P15923 654 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
LDHA-221ENST00000543445 GTF3C2Q8WUA4 911 aaPredicted RBP8.6□□□□□ -1.03
LDHA-221ENST00000543445 SLC10A4Q96EP9 437 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 BCL11AQ9H165 835 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 WBP1LQ9NX94 342 aa8.6□□□□□ -1.03
LDHA-221ENST00000543445 ADH1BP00325 375 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 BAP1Q92560 729 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 GLI3P10071 1580 aa8.59□□□□□ -1.03
LDHA-221ENST00000543445 RALGAPBQ86X10 1494 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 MARF1Q9Y4F3 1742 aaKnown RBP8.58□□□□□ -1.04
LDHA-221ENST00000543445 ADGRB1O14514 1584 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 TNS3Q68CZ2 1445 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 PTCD1O75127 700 aaKnown RBP8.58□□□□□ -1.04
LDHA-221ENST00000543445 LGR5O75473 907 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
LDHA-221ENST00000543445 SF3B2Q13435 895 aaKnown RBP8.58□□□□□ -1.04
LDHA-221ENST00000543445 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
LDHA-221ENST00000543445 UNC5CLQ8IV45 518 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 PRAM1Q96QH2 718 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 KIF1AQ12756 1690 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
LDHA-221ENST00000543445 VAMP1P23763 118 aa8.57□□□□□ -1.04
LDHA-221ENST00000543445 SEPT12Q8IYM1 358 aa8.57□□□□□ -1.04
LDHA-221ENST00000543445 ASB16Q96NS5 453 aa8.57□□□□□ -1.04
LDHA-221ENST00000543445 MKNK1Q9BUB5 465 aa8.57□□□□□ -1.04
LDHA-221ENST00000543445 SEPT3Q9UH03 358 aa8.57□□□□□ -1.04
LDHA-221ENST00000543445 DHX57Q6P158 1386 aaKnown RBP8.57□□□□□ -1.04
LDHA-221ENST00000543445 DLC1Q96QB1 1528 aa8.56□□□□□ -1.04
LDHA-221ENST00000543445 M0R2N6 131 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms