RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 HSPA6P17066 643 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 MYBPC2Q14324 1141 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
DDX55-206ENST00000539934 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 AMIGO3Q86WK7 504 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 ZBTB9Q96C00 473 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 DONSONQ9NYP3 566 aa15.25■□□□□ 0.03
DDX55-206ENST00000539934 HOXC9P31274 260 aa15.24■□□□□ 0.03
DDX55-206ENST00000539934 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
DDX55-206ENST00000539934 GNAI1P63096 354 aa15.24■□□□□ 0.03
DDX55-206ENST00000539934 FOXD4L6Q3SYB3 417 aaPredicted RBP15.24■□□□□ 0.03
DDX55-206ENST00000539934 FOXD4L3Q6VB84 417 aaPredicted RBP15.24■□□□□ 0.03
DDX55-206ENST00000539934 FAM210AQ96ND0 272 aa15.24■□□□□ 0.03
DDX55-206ENST00000539934 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
DDX55-206ENST00000539934 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
DDX55-206ENST00000539934 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
DDX55-206ENST00000539934 PANK1Q8TE04 598 aa15.23■□□□□ 0.03
DDX55-206ENST00000539934 IP6K1Q92551 441 aa15.23■□□□□ 0.03
DDX55-206ENST00000539934 BRMS1Q9HCU9 246 aa15.23■□□□□ 0.03
DDX55-206ENST00000539934 RGPD2P0DJD1 1756 aa15.22■□□□□ 0.03
DDX55-206ENST00000539934 DNAJC14Q6Y2X3 702 aaPredicted RBP15.22■□□□□ 0.03
DDX55-206ENST00000539934 ARHGEF1Q92888 912 aaKnown RBP15.22■□□□□ 0.03
DDX55-206ENST00000539934 EYA1Q99502 592 aa15.22■□□□□ 0.03
DDX55-206ENST00000539934 COG6Q9Y2V7 657 aa15.22■□□□□ 0.03
DDX55-206ENST00000539934 IGSF1Q8N6C5 1336 aa15.22■□□□□ 0.03
DDX55-206ENST00000539934 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
DDX55-206ENST00000539934 ZNF853P0CG23 659 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 QSER1Q2KHR3 1735 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 MEGF6O75095 1541 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 MRE11P49959 708 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 KDRP35968 1356 aa15.21■□□□□ 0.03
DDX55-206ENST00000539934 UQCRHLA0A096LP55 91 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 UQCRHP07919 91 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 ZKSCAN2Q63HK3 967 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 MPRIPQ6WCQ1 1025 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 SSH1Q8WYL5 1049 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 LY75O60449 1722 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 RAD21O60216 631 aa15.2■□□□□ 0.02
DDX55-206ENST00000539934 CALRP27797 417 aaKnown RBP15.19■□□□□ 0.02
DDX55-206ENST00000539934 SDR16C5Q8N3Y7 309 aa15.19■□□□□ 0.02
DDX55-206ENST00000539934 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
DDX55-206ENST00000539934 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
DDX55-206ENST00000539934 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
DDX55-206ENST00000539934 MS4A1P11836 297 aa15.19■□□□□ 0.02
DDX55-206ENST00000539934 CALR3Q96L12 384 aaKnown RBP15.19■□□□□ 0.02
DDX55-206ENST00000539934 HTRA3P83110 453 aa15.18■□□□□ 0.02
DDX55-206ENST00000539934 MNS1Q8NEH6 495 aa15.18■□□□□ 0.02
DDX55-206ENST00000539934 FEZ2Q9UHY8 353 aaPredicted RBP15.18■□□□□ 0.02
DDX55-206ENST00000539934 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
DDX55-206ENST00000539934 KIF3CO14782 793 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 GTF2A1P52655 376 aaPredicted RBP15.17■□□□□ 0.02
DDX55-206ENST00000539934 ALDH1L2Q3SY69 923 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
DDX55-206ENST00000539934 MSL3Q8N5Y2 521 aaKnown RBP15.17■□□□□ 0.02
DDX55-206ENST00000539934 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 ADCY9O60503 1353 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 CAPN15O75808 1086 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 RLBP1P12271 317 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 RBM25P49756 843 aaKnown RBP15.17■□□□□ 0.02
DDX55-206ENST00000539934 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
DDX55-206ENST00000539934 ZC3H12AQ5D1E8 599 aaKnown RBP15.17■□□□□ 0.02
DDX55-206ENST00000539934 MCM10Q7L590 875 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
DDX55-206ENST00000539934 KDM2BQ8NHM5 1336 aa15.16■□□□□ 0.02
DDX55-206ENST00000539934 IPO8O15397 1037 aaKnown RBP15.16■□□□□ 0.02
DDX55-206ENST00000539934 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
DDX55-206ENST00000539934 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
DDX55-206ENST00000539934 RTF1Q92541 710 aaKnown RBP15.16■□□□□ 0.02
DDX55-206ENST00000539934 BACH2Q9BYV9 841 aa15.16■□□□□ 0.02
DDX55-206ENST00000539934 PAIP2Q9BPZ3 127 aaKnown RBP15.16■□□□□ 0.02
DDX55-206ENST00000539934 MED4Q9NPJ6 270 aa15.16■□□□□ 0.02
DDX55-206ENST00000539934 RIPOR2Q9Y4F9 1068 aa15.16■□□□□ 0.02
DDX55-206ENST00000539934 KLHL33A6NCF5 533 aa15.15■□□□□ 0.02
DDX55-206ENST00000539934 GABPB1Q06547 395 aaPredicted RBP15.15■□□□□ 0.02
DDX55-206ENST00000539934 RAD50Q92878 1312 aa15.15■□□□□ 0.02
DDX55-206ENST00000539934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
DDX55-206ENST00000539934 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
DDX55-206ENST00000539934 TDO2P48775 406 aa15.15■□□□□ 0.02
DDX55-206ENST00000539934 TWISTNBQ3B726 338 aaPredicted RBP15.15■□□□□ 0.02
DDX55-206ENST00000539934 ZNF771Q7L3S4 317 aaPredicted RBP15.15■□□□□ 0.02
DDX55-206ENST00000539934 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
DDX55-206ENST00000539934 MTMR7Q9Y216 660 aa15.15■□□□□ 0.02
DDX55-206ENST00000539934 PALLDQ8WX93 1383 aa15.14■□□□□ 0.01
DDX55-206ENST00000539934 FAM208AQ9UK61 1670 aaKnown RBP15.14■□□□□ 0.01
DDX55-206ENST00000539934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.14■□□□□ 0.01
DDX55-206ENST00000539934 VAMP4O75379 141 aa15.14■□□□□ 0.01
DDX55-206ENST00000539934 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
DDX55-206ENST00000539934 ATF7IPQ6VMQ6 1270 aa15.14■□□□□ 0.01
DDX55-206ENST00000539934 AK7Q96M32 723 aa15.14■□□□□ 0.01
DDX55-206ENST00000539934 TRIM27P14373 513 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 SCP2P22307 547 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 MVPQ14764 893 aaKnown RBP15.13■□□□□ 0.01
DDX55-206ENST00000539934 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 C5P01031 1676 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
DDX55-206ENST00000539934 COQ9O75208 318 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms