RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 TPTE2Q6XPS3 522 aa27.12■■□□□ 1.93
CAPN1-220ENST00000530567 PPP1R42Q7Z4L9 355 aa27.12■■□□□ 1.93
CAPN1-220ENST00000530567 CCDC191Q8NCU4 936 aa27.12■■□□□ 1.93
CAPN1-220ENST00000530567 LINS1Q8NG48 757 aa27.12■■□□□ 1.93
CAPN1-220ENST00000530567 UTP14AQ9BVJ6 771 aaKnown RBP27.12■■□□□ 1.93
CAPN1-220ENST00000530567 TNRC6CQ9HCJ0 1690 aaKnown RBP27.11■■□□□ 1.93
CAPN1-220ENST00000530567 ARHGAP45Q92619 1136 aa27.11■■□□□ 1.93
CAPN1-220ENST00000530567 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
CAPN1-220ENST00000530567 ERFEQ4G0M1 354 aa27.1■■□□□ 1.93
CAPN1-220ENST00000530567 KLHL34Q8N239 644 aa27.1■■□□□ 1.93
CAPN1-220ENST00000530567 CWC25Q9NXE8 425 aaPredicted RBP27.1■■□□□ 1.93
CAPN1-220ENST00000530567 SYNE4Q8N205 404 aa27.09■■□□□ 1.93
CAPN1-220ENST00000530567 API5Q9BZZ5 524 aaKnown RBP27.09■■□□□ 1.93
CAPN1-220ENST00000530567 RIC1Q4ADV7 1423 aa27.09■■□□□ 1.93
CAPN1-220ENST00000530567 TRIM27P14373 513 aa27.08■■□□□ 1.93
CAPN1-220ENST00000530567 ST5P78524 1137 aa27.08■■□□□ 1.93
CAPN1-220ENST00000530567 SLC4A10Q6U841 1118 aa27.08■■□□□ 1.93
CAPN1-220ENST00000530567 NLGN2Q8NFZ4 835 aa27.08■■□□□ 1.93
CAPN1-220ENST00000530567 FRAT1Q92837 279 aaPredicted RBP27.08■■□□□ 1.93
CAPN1-220ENST00000530567 SYT17Q9BSW7 474 aa27.08■■□□□ 1.93
CAPN1-220ENST00000530567 TRMT112Q9UI30 125 aaKnown RBP27.08■■□□□ 1.93
CAPN1-220ENST00000530567 TNNQ9UQP3 1299 aa27.08■■□□□ 1.93
CAPN1-220ENST00000530567 COL11A2P13942 1736 aaPredicted RBP27.07■■□□□ 1.92
CAPN1-220ENST00000530567 BRIP1Q9BX63 1249 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 ABCC4O15439 1325 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 SH3TC1Q8TE82 1336 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 DDX60Q8IY21 1712 aaKnown RBP27.07■■□□□ 1.92
CAPN1-220ENST00000530567 NPHP1O15259 732 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 GCKRQ14397 625 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 ATF7IPQ6VMQ6 1270 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 FAM89AQ96GI7 184 aa27.07■■□□□ 1.92
CAPN1-220ENST00000530567 LAMB2P55268 1798 aa27.06■■□□□ 1.92
CAPN1-220ENST00000530567 IPO8O15397 1037 aaKnown RBP27.06■■□□□ 1.92
CAPN1-220ENST00000530567 ZBTB38Q8NAP3 1195 aaPredicted RBP27.06■■□□□ 1.92
CAPN1-220ENST00000530567 PCCAP05165 728 aaPredicted RBP27.05■■□□□ 1.92
CAPN1-220ENST00000530567 GTF2E1P29083 439 aaPredicted RBP27.05■■□□□ 1.92
CAPN1-220ENST00000530567 SLC10A5Q5PT55 438 aa27.05■■□□□ 1.92
CAPN1-220ENST00000530567 ZKSCAN2Q63HK3 967 aa27.05■■□□□ 1.92
CAPN1-220ENST00000530567 SRCIN1Q9C0H9 1055 aa27.05■■□□□ 1.92
CAPN1-220ENST00000530567 ALDH1L1O75891 902 aa27.04■■□□□ 1.92
CAPN1-220ENST00000530567 DLEC1Q9Y238 1755 aa27.04■■□□□ 1.92
CAPN1-220ENST00000530567 TGFB2P61812 414 aa27.03■■□□□ 1.92
CAPN1-220ENST00000530567 RTL5Q5HYW3 569 aaPredicted RBP27.03■■□□□ 1.92
CAPN1-220ENST00000530567 JARID2Q92833 1246 aaPredicted RBP27.03■■□□□ 1.92
CAPN1-220ENST00000530567 KLRG2A4D1S0 409 aaPredicted RBP27.02■■□□□ 1.92
CAPN1-220ENST00000530567 H7C1W4 665 aa27.02■■□□□ 1.92
CAPN1-220ENST00000530567 CASP7P55210 303 aa27.02■■□□□ 1.92
CAPN1-220ENST00000530567 C3orf67Q6ZVT6 689 aa27.02■■□□□ 1.92
CAPN1-220ENST00000530567 BRCA1P38398 1863 aaKnown RBP27.02■■□□□ 1.92
CAPN1-220ENST00000530567 HCLS1P14317 486 aaPredicted RBP27.01■■□□□ 1.91
CAPN1-220ENST00000530567 DPEP1P16444 411 aa27.01■■□□□ 1.91
CAPN1-220ENST00000530567 CHRNA5P30532 468 aa27.01■■□□□ 1.91
CAPN1-220ENST00000530567 A0A0G2JLW4 131 aa27■■□□□ 1.91
CAPN1-220ENST00000530567 KCNA3P22001 575 aa27■■□□□ 1.91
CAPN1-220ENST00000530567 PDE6BP35913 854 aa27■■□□□ 1.91
CAPN1-220ENST00000530567 CDHR2Q9BYE9 1310 aa27■■□□□ 1.91
CAPN1-220ENST00000530567 CCT4P50991 539 aaKnown RBP26.99■■□□□ 1.91
CAPN1-220ENST00000530567 CRY2Q49AN0 593 aa26.99■■□□□ 1.91
CAPN1-220ENST00000530567 UBE3BQ7Z3V4 1068 aa26.99■■□□□ 1.91
CAPN1-220ENST00000530567 CLUAP1Q96AJ1 413 aa26.99■■□□□ 1.91
CAPN1-220ENST00000530567 GRM8O00222 908 aa26.99■■□□□ 1.91
CAPN1-220ENST00000530567 IRS4O14654 1257 aaPredicted RBP26.99■■□□□ 1.91
CAPN1-220ENST00000530567 INTS3Q68E01 1043 aaKnown RBP26.99■■□□□ 1.91
CAPN1-220ENST00000530567 C2CD5Q86YS7 1000 aa26.99■■□□□ 1.91
CAPN1-220ENST00000530567 RLBP1P12271 317 aa26.98■■□□□ 1.91
CAPN1-220ENST00000530567 PLIN1O60240 522 aa26.97■■□□□ 1.91
CAPN1-220ENST00000530567 SRGNP10124 158 aa26.97■■□□□ 1.91
CAPN1-220ENST00000530567 UTYO14607 1347 aa26.97■■□□□ 1.91
CAPN1-220ENST00000530567 PDZRN3Q9UPQ7 1066 aa26.96■■□□□ 1.91
CAPN1-220ENST00000530567 H0YIN7 160 aa26.95■■□□□ 1.9
CAPN1-220ENST00000530567 DZIP1LQ8IYY4 767 aaKnown RBP26.95■■□□□ 1.9
CAPN1-220ENST00000530567 TMEM57Q8N5G2 664 aa26.95■■□□□ 1.9
CAPN1-220ENST00000530567 NLRP3Q96P20 1036 aa26.95■■□□□ 1.9
CAPN1-220ENST00000530567 USP44Q9H0E7 712 aa26.95■■□□□ 1.9
CAPN1-220ENST00000530567 NBPF7P0C2Y1 421 aaPredicted RBP26.94■■□□□ 1.9
CAPN1-220ENST00000530567 MYH3P11055 1940 aa26.93■■□□□ 1.9
CAPN1-220ENST00000530567 PLA2G12BQ9BX93 195 aa26.93■■□□□ 1.9
CAPN1-220ENST00000530567 C9orf78Q9NZ63 289 aaPredicted RBP26.93■■□□□ 1.9
CAPN1-220ENST00000530567 PDE8AO60658 829 aa26.92■■□□□ 1.9
CAPN1-220ENST00000530567 NPR1P16066 1061 aa26.91■■□□□ 1.9
CAPN1-220ENST00000530567 SF3B3Q15393 1217 aaKnown RBP26.91■■□□□ 1.9
CAPN1-220ENST00000530567 STYK1Q6J9G0 422 aa26.91■■□□□ 1.9
CAPN1-220ENST00000530567 FTSJ3Q8IY81 847 aaKnown RBP26.91■■□□□ 1.9
CAPN1-220ENST00000530567 PANK1Q8TE04 598 aa26.91■■□□□ 1.9
CAPN1-220ENST00000530567 MASTLQ96GX5 879 aa26.91■■□□□ 1.9
CAPN1-220ENST00000530567 HOXA10P31260 410 aaPredicted RBP26.9■■□□□ 1.9
CAPN1-220ENST00000530567 KAZALD1Q96I82 304 aa26.9■■□□□ 1.9
CAPN1-220ENST00000530567 WWC3Q9ULE0 1092 aa26.9■■□□□ 1.9
CAPN1-220ENST00000530567 HSP90B1P14625 803 aaKnown RBP26.9■■□□□ 1.9
CAPN1-220ENST00000530567 CTSWP56202 376 aa26.9■■□□□ 1.9
CAPN1-220ENST00000530567 COL4A1P02462 1669 aa26.9■■□□□ 1.9
CAPN1-220ENST00000530567 GOLGB1Q14789 3259 aaKnown RBP26.89■■□□□ 1.9
CAPN1-220ENST00000530567 RRP1P56182 461 aaKnown RBP26.89■■□□□ 1.89
CAPN1-220ENST00000530567 EPHA10Q5JZY3 1008 aa26.89■■□□□ 1.89
CAPN1-220ENST00000530567 C20orf194Q5TEA3 1177 aa26.89■■□□□ 1.89
CAPN1-220ENST00000530567 ZNF622Q969S3 477 aaKnown RBP eCLIP26.89■■□□□ 1.89
CAPN1-220ENST00000530567 SUCLG2Q96I99 432 aa26.89■■□□□ 1.89
CAPN1-220ENST00000530567 MEIS3Q99687 375 aa26.89■■□□□ 1.89
CAPN1-220ENST00000530567 PIM2Q9P1W9 311 aa26.89■■□□□ 1.89
CAPN1-220ENST00000530567 CACNA1SQ13698 1873 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms