RNA–Protein interactions for RNA: ENST00000526567.5

ATM-209, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene ATM, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-209ENST00000526567 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
ATM-209ENST00000526567 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 GPTP24298 496 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 NUP98P52948 1817 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 CASP7P55210 303 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 KAZALD1Q96I82 304 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 AK7Q96M32 723 aa11.22□□□□□ -0.61
ATM-209ENST00000526567 C9orf78Q9NZ63 289 aaPredicted RBP11.22□□□□□ -0.61
ATM-209ENST00000526567 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 PHF14O94880 888 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 ZNF827Q17R98 1081 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.61
ATM-209ENST00000526567 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
ATM-209ENST00000526567 CWC25Q9NXE8 425 aaPredicted RBP11.21□□□□□ -0.61
ATM-209ENST00000526567 SRP68Q9UHB9 627 aaKnown RBP11.21□□□□□ -0.61
ATM-209ENST00000526567 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
ATM-209ENST00000526567 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.62
ATM-209ENST00000526567 A0A087WZG4 1122 aa11.2□□□□□ -0.62
ATM-209ENST00000526567 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
ATM-209ENST00000526567 NLRP10Q86W26 655 aa11.2□□□□□ -0.62
ATM-209ENST00000526567 RPAP2Q8IXW5 612 aaPredicted RBP11.2□□□□□ -0.62
ATM-209ENST00000526567 ZNF34Q8IZ26 560 aa11.2□□□□□ -0.62
ATM-209ENST00000526567 CCDC191Q8NCU4 936 aa11.2□□□□□ -0.62
ATM-209ENST00000526567 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
ATM-209ENST00000526567 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
ATM-209ENST00000526567 H7C1W4 665 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
ATM-209ENST00000526567 TRIM28Q13263 835 aaKnown RBP11.19□□□□□ -0.62
ATM-209ENST00000526567 EZH2Q15910 746 aaKnown RBP11.19□□□□□ -0.62
ATM-209ENST00000526567 HSP90AB3PQ58FF7 597 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
ATM-209ENST00000526567 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 SMC5Q8IY18 1101 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
ATM-209ENST00000526567 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
ATM-209ENST00000526567 COL24A1Q17RW2 1714 aa11.18□□□□□ -0.62
ATM-209ENST00000526567 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
ATM-209ENST00000526567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
ATM-209ENST00000526567 ATP8B2P98198 1209 aa11.18□□□□□ -0.62
ATM-209ENST00000526567 MTX1Q13505 466 aa11.18□□□□□ -0.62
ATM-209ENST00000526567 PPP1R42Q7Z4L9 355 aa11.18□□□□□ -0.62
ATM-209ENST00000526567 PCCAP05165 728 aaPredicted RBP11.17□□□□□ -0.62
ATM-209ENST00000526567 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 TBC1D9BQ66K14 1250 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 DEFB132Q7Z7B7 95 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 SYNE4Q8N205 404 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
ATM-209ENST00000526567 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
ATM-209ENST00000526567 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
ATM-209ENST00000526567 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
ATM-209ENST00000526567 SRGAP3O43295 1099 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 NTSR2O95665 410 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 SSFA2P28290 1259 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 FOXO4P98177 505 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 RABL6Q3YEC7 729 aaPredicted RBP11.16□□□□□ -0.62
ATM-209ENST00000526567 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 DCTPP1Q9H773 170 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 ZNF652Q9Y2D9 606 aa11.16□□□□□ -0.62
ATM-209ENST00000526567 CDHR2Q9BYE9 1310 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 FAM177BA6PVY3 158 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 HAX1O00165 279 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 RGL2O15211 777 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 HMMRO75330 724 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 RFC4P35249 363 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 PARP10Q53GL7 1025 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 BICDL1Q6ZP65 573 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
ATM-209ENST00000526567 EXOC6BQ9Y2D4 811 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 LAMB2P55268 1798 aa11.15□□□□□ -0.62
ATM-209ENST00000526567 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.63
ATM-209ENST00000526567 PNPLA7Q6ZV29 1317 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 ZPR1O75312 459 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 GYS1P13807 737 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 PDE4AP27815 886 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 BAG6P46379 1132 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
ATM-209ENST00000526567 NUCB1Q02818 461 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 PLA2G12BQ9BX93 195 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 TRMT112Q9UI30 125 aaKnown RBP11.14□□□□□ -0.63
ATM-209ENST00000526567 PA2G4Q9UQ80 394 aaKnown RBP11.14□□□□□ -0.63
ATM-209ENST00000526567 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
ATM-209ENST00000526567 APBB1O00213 710 aa11.13□□□□□ -0.63
ATM-209ENST00000526567 IRS4O14654 1257 aaPredicted RBP11.13□□□□□ -0.63
ATM-209ENST00000526567 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATM-209ENST00000526567 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
ATM-209ENST00000526567 LMBR1LQ6UX01 489 aa11.13□□□□□ -0.63
ATM-209ENST00000526567 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
ATM-209ENST00000526567 NUTM1Q86Y26 1132 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms