RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 METTL24Q5JXM2 366 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 TEX13AQ9BXU3 409 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 CAMK4Q16566 473 aa13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 RRP12Q5JTH9 1297 aaKnown RBP13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 BICC1Q9H694 974 aaKnown RBP13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 IDH1O75874 414 aaKnown RBP13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 ZSCAN22P10073 491 aaPredicted RBP13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 LMBR1LQ6UX01 489 aa13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 MED14O60244 1454 aa13.3□□□□□ -0.28
PCDHGB4-201ENST00000519479 AK2P54819 239 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 NAT10Q9H0A0 1025 aaKnown RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 MAP3K11Q16584 847 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 INTS4Q96HW7 963 aaKnown RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 TPM3P06753 285 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 C8orf37Q96NL8 207 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 SNRKQ9NRH2 765 aa13.29□□□□□ -0.28
PCDHGB4-201ENST00000519479 CPA1P15085 419 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 NEK1Q96PY6 1258 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 TECPR2O15040 1411 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 GPTP24298 496 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
PCDHGB4-201ENST00000519479 LRRC7Q96NW7 1537 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 CD2BP2O95400 341 aaKnown RBP13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 LRSAM1Q6UWE0 723 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 STK11IPQ8N1F8 1099 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 SSH3Q8TE77 659 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 DCAF5Q96JK2 942 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 MROH2AA6NES4 1674 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 HMGB1P09429 215 aaKnown RBP13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 UBE2HP62256 183 aa13.27□□□□□ -0.28
PCDHGB4-201ENST00000519479 TPM2P07951 284 aa13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 HOOK1Q9UJC3 728 aaKnown RBP13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 AOX1Q06278 1338 aa13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 SGSM2O43147 1006 aa13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 DDB1Q16531 1140 aa13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 KLHDC4Q8TBB5 520 aa13.27□□□□□ -0.29
PCDHGB4-201ENST00000519479 SLIT1O75093 1534 aa13.26□□□□□ -0.29
PCDHGB4-201ENST00000519479 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB4-201ENST00000519479 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
PCDHGB4-201ENST00000519479 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
PCDHGB4-201ENST00000519479 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
PCDHGB4-201ENST00000519479 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
PCDHGB4-201ENST00000519479 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 PPFIA3O75145 1194 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 CREB3L3Q68CJ9 461 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 BRF1Q92994 677 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 NACAP1Q9BZK3 213 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 CKAP2LQ8IYA6 745 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
PCDHGB4-201ENST00000519479 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 TFCP2Q12800 502 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 NOL10Q9BSC4 688 aaKnown RBP13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 ARHGAP23Q9P227 1491 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 F13A1P00488 732 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 AIDAQ96BJ3 306 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 BEND3Q5T5X7 828 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 CCDC171Q6TFL3 1326 aa13.24□□□□□ -0.29
PCDHGB4-201ENST00000519479 PES1O00541 588 aaKnown RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 HCLS1P14317 486 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 HMGN5P82970 282 aaKnown RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 PALD1Q9ULE6 856 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 RAD50Q92878 1312 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 G3V3G9 751 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 HAND2P61296 217 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms