RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 KDRP35968 1356 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 GCGRP47871 477 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 AKAP4Q5JQC9 854 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PRPF38BQ5VTL8 546 aaKnown RBP7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 MPRIPQ6WCQ1 1025 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 CCDC146Q8IYE0 955 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 FAM9BQ8IZU0 186 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 CALR3Q96L12 384 aaKnown RBP7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 TRAIPQ9BWF2 469 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 MAPK8IP3Q9UPT6 1336 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 USP17L8P0C7I0 530 aa7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 USP46P62068 366 aa7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PTF1AQ7RTS3 328 aa7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PNISRQ8TF01 805 aaKnown RBP7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SCUBE2Q9NQ36 999 aa7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 KAT6BQ8WYB5 2073 aa7.64□□□□□ -1.19
SCARNA6.1-201ENST00000516989 FAM208AQ9UK61 1670 aaKnown RBP7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 NCAPD2Q15021 1401 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 TNS2Q63HR2 1409 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 GNAT3A8MTJ3 354 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 FDX1P10109 184 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RIPK4P57078 832 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 CABP4P57796 275 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 MAMSTRQ6ZN01 415 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 DEFB132Q7Z7B7 95 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RTF1Q92541 710 aaKnown RBP7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RUNDC1Q96C34 613 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 DCAF5Q96JK2 942 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PLEKHF1Q96S99 279 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 ZBTB3Q9H5J0 574 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 LGR6Q9HBX8 967 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 KIAA1468Q9P260 1216 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 THSD7AQ9UPZ6 1657 aa7.63□□□□□ -1.19
SCARNA6.1-201ENST00000516989 BRWD3Q6RI45 1802 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SENP3-EIF4A1A0A087X0R7 540 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 ERVV-2B6SEH9 535 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 CCER2I3L3R5 266 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 HOXA2O43364 376 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 BAG6P46379 1132 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 TMOD3Q9NYL9 352 aa7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RRP7AQ9Y3A4 280 aaKnown RBP7.62□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PARP4Q9UKK3 1724 aaKnown RBP7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SLC10A3P09131 477 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 TMPOP42166 694 aaKnown RBP7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 DCTN1Q14203 1278 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 NFE2L2Q16236 605 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 IL17REQ8NFR9 667 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PIGBQ92521 554 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 GLMNQ92990 594 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PCDHGC3Q9UN70 934 aa7.61□□□□□ -1.19
SCARNA6.1-201ENST00000516989 LRRC37A3O60309 1634 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 APAF1O14727 1248 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SNPHO15079 494 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 CTDSPL2Q05D32 466 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 TEFQ10587 303 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 EZH2Q15910 746 aaKnown RBP7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SWT1Q5T5J6 900 aaKnown RBP7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 MCM10Q7L590 875 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 KCTD17Q8N5Z5 321 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RETREG2Q8NC44 543 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SALL2Q9Y467 1007 aaPredicted RBP7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 BCL9O00512 1426 aa7.6□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 RGPD1P0DJD0 1748 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 PLSCR1O15162 318 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 GUCA2AQ02747 115 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SMARCC1Q92922 1105 aaPredicted RBP7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 HLA-CQ95604 372 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 ZBED2Q9BTP6 218 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 SLC52A2Q9HAB3 445 aa7.59□□□□□ -1.19
SCARNA6.1-201ENST00000516989 MAP3K5Q99683 1374 aa7.59□□□□□ -1.2
SCARNA6.1-201ENST00000516989 LMOD3Q0VAK6 560 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SLC39A6Q13433 755 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 IRF5Q13568 498 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 TXNRD1Q16881 649 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 HDGFL1Q5TGJ6 251 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 CAMKK2Q96RR4 588 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 THUMPD2Q9BTF0 503 aaKnown RBP7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ATG3Q9NT62 314 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ASAP1Q9ULH1 1129 aa7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
SCARNA6.1-201ENST00000516989 WNK3Q9BYP7 1800 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 BTBD11A6QL63 1104 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 PTCD1O75127 700 aaKnown RBP7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 PSEN2P49810 448 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 KCNQ4P56696 695 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 MTMR2Q13614 643 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 TAF7Q15545 349 aaPredicted RBP7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 NPM2Q86SE8 214 aaKnown RBP7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 TTC5Q8N0Z6 440 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms