RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
NR1I3-230ENST00000511944 BCL9O00512 1426 aa11.55□□□□□ -0.56
NR1I3-230ENST00000511944 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
NR1I3-230ENST00000511944 CABP4P57796 275 aa11.55□□□□□ -0.56
NR1I3-230ENST00000511944 C20orf194Q5TEA3 1177 aa11.55□□□□□ -0.56
NR1I3-230ENST00000511944 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
NR1I3-230ENST00000511944 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
NR1I3-230ENST00000511944 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-230ENST00000511944 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 GLI3P10071 1580 aa11.54□□□□□ -0.56
NR1I3-230ENST00000511944 RGS12O14924 1447 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 ATRNO75882 1429 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-230ENST00000511944 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-230ENST00000511944 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
NR1I3-230ENST00000511944 DDB1Q16531 1140 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-230ENST00000511944 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
NR1I3-230ENST00000511944 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-230ENST00000511944 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-230ENST00000511944 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 ZMYND10O75800 440 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
NR1I3-230ENST00000511944 PRSS12P56730 875 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
NR1I3-230ENST00000511944 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 USP21Q9UK80 565 aa11.52□□□□□ -0.57
NR1I3-230ENST00000511944 GNPATO15228 680 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 RLBP1P12271 317 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
NR1I3-230ENST00000511944 HIC1Q14526 733 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
NR1I3-230ENST00000511944 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-230ENST00000511944 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
NR1I3-230ENST00000511944 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-230ENST00000511944 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
NR1I3-230ENST00000511944 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-230ENST00000511944 FLIIQ13045 1269 aa11.5□□□□□ -0.57
NR1I3-230ENST00000511944 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
NR1I3-230ENST00000511944 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-230ENST00000511944 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
NR1I3-230ENST00000511944 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
NR1I3-230ENST00000511944 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
NR1I3-230ENST00000511944 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-230ENST00000511944 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
NR1I3-230ENST00000511944 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
NR1I3-230ENST00000511944 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
NR1I3-230ENST00000511944 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
NR1I3-230ENST00000511944 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 KCNQ3O43525 872 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 ANKRD13DQ6ZTN6 518 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
NR1I3-230ENST00000511944 AFF2P51816 1311 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
NR1I3-230ENST00000511944 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
NR1I3-230ENST00000511944 C5P01031 1676 aa11.47□□□□□ -0.57
NR1I3-230ENST00000511944 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
NR1I3-230ENST00000511944 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-230ENST00000511944 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-230ENST00000511944 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-230ENST00000511944 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-230ENST00000511944 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 PIGBQ92521 554 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
NR1I3-230ENST00000511944 ITGB4P16144 1822 aa11.46□□□□□ -0.58
NR1I3-230ENST00000511944 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-230ENST00000511944 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-230ENST00000511944 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-230ENST00000511944 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
NR1I3-230ENST00000511944 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
NR1I3-230ENST00000511944 TK2O00142 265 aa11.44□□□□□ -0.58
NR1I3-230ENST00000511944 HRO43593 1189 aa11.44□□□□□ -0.58
NR1I3-230ENST00000511944 GNAI3P08754 354 aa11.44□□□□□ -0.58
NR1I3-230ENST00000511944 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NR1I3-230ENST00000511944 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
NR1I3-230ENST00000511944 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms