RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CATIPQ7Z7H3 387 aa6.68□□□□□ -1.34
USP38-203ENST00000511739 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
USP38-203ENST00000511739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP38-203ENST00000511739 JDP2Q8WYK2 163 aa6.68□□□□□ -1.34
USP38-203ENST00000511739 CALML4Q96GE6 196 aa6.68□□□□□ -1.34
USP38-203ENST00000511739 TAOK3Q9H2K8 898 aa6.68□□□□□ -1.34
USP38-203ENST00000511739 BCAR3O75815 825 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 KIF4AO95239 1232 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 PLS1Q14651 629 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 CCDC102AQ96A19 550 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 GPTP24298 496 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 TRAF1Q13077 416 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 RRS1Q15050 365 aaKnown RBP6.67□□□□□ -1.34
USP38-203ENST00000511739 ARAP3Q8WWN8 1544 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 FSD2A1L4K1 749 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 ZBTB24O43167 697 aaPredicted RBP6.67□□□□□ -1.34
USP38-203ENST00000511739 PHACTR2O75167 634 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 PPP1R42Q7Z4L9 355 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 NEO1Q92859 1461 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 IDEP14735 1019 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 MRE11P49959 708 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 DNA2P51530 1060 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 UQCRHLA0A096LP55 91 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 SH3BP5O60239 455 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 KIF5BP33176 963 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 PDE4BQ07343 736 aa6.67□□□□□ -1.34
USP38-203ENST00000511739 RBM26Q5T8P6 1007 aaKnown RBP6.67□□□□□ -1.34
USP38-203ENST00000511739 TSR2Q969E8 191 aaKnown RBP6.67□□□□□ -1.34
USP38-203ENST00000511739 TSPY2A6NKD2 308 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 CCDC40Q4G0X9 1142 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 NBPF5PQ86XG9 351 aaPredicted RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 PPP1R14CQ8TAE6 165 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 SREK1Q8WXA9 508 aaKnown RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 CRACR2AQ9BSW2 395 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 TCP11L1Q9NUJ3 509 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 POLR3AO14802 1390 aaPredicted RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 IL16Q14005 1332 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 IFIT3O14879 490 aaKnown RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 AMPD3Q01432 767 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 FILIP1Q7Z7B0 1213 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 TCHPQ9BT92 498 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 SAMD9LQ8IVG5 1584 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 ZNF213O14771 459 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 USP37Q86T82 979 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 SPATA24Q86W54 205 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 BACH2Q9BYV9 841 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 NUP62CLQ9H1M0 184 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 KAT14Q9H8E8 782 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 IKBKGQ9Y6K9 419 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 LPXNO60711 386 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 USO1O60763 962 aaKnown RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 TMPOP42166 694 aaKnown RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 AMOTQ4VCS5 1084 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 TEX13AQ9BXU3 409 aaPredicted RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 TMCO5BA8MYB1 307 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 TBCAO75347 108 aaKnown RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 GSTO1P78417 241 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 SSRP1Q08945 709 aaKnown RBP6.66□□□□□ -1.34
USP38-203ENST00000511739 SPECC1Q5M775 1068 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 VEZTQ9HBM0 779 aa6.66□□□□□ -1.34
USP38-203ENST00000511739 PAFAH1B1P43034 410 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 NFE2L2Q16236 605 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 ALDH1L2Q3SY69 923 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 PDZRN3Q9UPQ7 1066 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 LRPPRCP42704 1394 aaKnown RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 MVPQ14764 893 aaKnown RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 MTERF4Q7Z6M4 381 aaKnown RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 NUDT16Q96DE0 195 aaKnown RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 PER1O15534 1290 aaPredicted RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 FOXO3O43524 673 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 ZWINTO95229 277 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 MTIF2P46199 727 aaKnown RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 PRPF4BQ13523 1007 aaKnown RBP6.65□□□□□ -1.34
USP38-203ENST00000511739 ALS2CR12Q96Q35 445 aa6.65□□□□□ -1.34
USP38-203ENST00000511739 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 GOLGA8BA8MQT2 603 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 TRAK2O60296 914 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 PDIA4P13667 645 aaKnown RBP6.65□□□□□ -1.35
USP38-203ENST00000511739 PLXNC1O60486 1568 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 F8W031 263 aaPredicted RBP6.65□□□□□ -1.35
USP38-203ENST00000511739 SLC4A8Q2Y0W8 1093 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 PPP4R3BQ5MIZ7 849 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 DUSP27Q5VZP5 1158 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 EP400NLQ6ZTU2 488 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 ERMNQ8TAM6 284 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 KIF1BPQ96EK5 621 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 IMPG2Q9BZV3 1241 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 BOLA2Q9H3K6 86 aa6.65□□□□□ -1.35
USP38-203ENST00000511739 BCCIPQ9P287 314 aaKnown RBP eCLIP6.65□□□□□ -1.35
USP38-203ENST00000511739 CDC42BPAQ5VT25 1732 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 NUTM1Q86Y26 1132 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 C8orf76Q96K31 380 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 MMRN2Q9H8L6 949 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 ABCC1P33527 1531 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 CHD1O14646 1710 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms