RNA–Protein interactions for RNA: ENST00000510071.5

RAPGEF6-209, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-209ENST00000510071 IQCB1Q15051 598 aa12.96□□□□□ -0.33
RAPGEF6-209ENST00000510071 ZSCAN26Q16670 478 aa12.96□□□□□ -0.33
RAPGEF6-209ENST00000510071 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF6-209ENST00000510071 PGBD1Q96JS3 809 aa12.96□□□□□ -0.33
RAPGEF6-209ENST00000510071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.96□□□□□ -0.335e-7■■■□□ 17.3
RAPGEF6-209ENST00000510071 FANCAO15360 1455 aa12.96□□□□□ -0.33
RAPGEF6-209ENST00000510071 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.33
RAPGEF6-209ENST00000510071 CHMP4CQ96CF2 233 aa12.96□□□□□ -0.34
RAPGEF6-209ENST00000510071 DDX11Q96FC9 970 aa12.96□□□□□ -0.34
RAPGEF6-209ENST00000510071 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
RAPGEF6-209ENST00000510071 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 CAMSAP1Q5T5Y3 1602 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 ABCC3O15438 1527 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 MYO1CO00159 1063 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 OAS2P29728 719 aaKnown RBP12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 GYS2P54840 703 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 LCMT1Q9UIC8 334 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 SMC2O95347 1197 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 CAVIN2O95810 425 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 GNL2Q13823 731 aaKnown RBP12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 STX1AQ16623 288 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 SARM1Q6SZW1 724 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 AOPEPQ8N6M6 819 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 EPC1Q9H2F5 836 aa12.95□□□□□ -0.34
RAPGEF6-209ENST00000510071 URI1O94763 535 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 FOSBP53539 338 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 COG3Q96JB2 828 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 L2HGDHQ9H9P8 463 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 NPATQ14207 1427 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 LMAN1P49257 510 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 FLIIQ13045 1269 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF6-209ENST00000510071 H3BQV1 296 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 RUFY2Q8WXA3 655 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 CWC15Q9P013 229 aaKnown RBP12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 NRDCO43847 1150 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 GSDMDP57764 484 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 COL9A3Q14050 684 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 PPP1R42Q7Z4L9 355 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 SOX12O15370 315 aa12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 GTF2A1P52655 376 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF6-209ENST00000510071 AOX1Q06278 1338 aa12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 SRGAP3O43295 1099 aa12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 SMC1AQ14683 1233 aaKnown RBP12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 CARD6Q9BX69 1037 aa12.92□□□□□ -0.34
RAPGEF6-209ENST00000510071 KINO60870 393 aaKnown RBP12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 MUM1L1Q5H9M0 696 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 CEP57L1Q8IYX8 460 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 ASXL2Q76L83 1435 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 FOXO3O43524 673 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 CASQ1P31415 396 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 CCDC73Q6ZRK6 1079 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 AK7Q96M32 723 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 JAK2O60674 1132 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 IDI1Q13907 227 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 DHX40Q8IX18 779 aaKnown RBP12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 TOMM22Q9NS69 142 aa12.91□□□□□ -0.34
RAPGEF6-209ENST00000510071 SASH3O75995 380 aa12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 ZCCHC11Q5TAX3 1644 aaKnown RBP12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 EVCP57679 992 aa12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 FTOQ9C0B1 505 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
RAPGEF6-209ENST00000510071 MROH1Q8NDA8 1641 aa12.89□□□□□ -0.35
RAPGEF6-209ENST00000510071 PSMA5P28066 241 aa12.89□□□□□ -0.35
RAPGEF6-209ENST00000510071 BRF1Q92994 677 aa12.89□□□□□ -0.35
RAPGEF6-209ENST00000510071 IFNKQ9P0W0 207 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms