RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RRP36Q96EU6 259 aaKnown RBP6.98□□□□□ -1.29
LINC02397-201ENST00000504409 AOX1Q06278 1338 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 CCDC92Q53HC0 331 aaPredicted RBP6.97□□□□□ -1.29
LINC02397-201ENST00000504409 TNPO1Q92973 898 aaKnown RBP6.97□□□□□ -1.29
LINC02397-201ENST00000504409 SPATA32Q96LK8 384 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 GFAPP14136 432 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 LRRC27Q9C0I9 530 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 RRP7BPQ9NSQ0 103 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 YEATS4O95619 227 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 TRPC3Q13507 836 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 MUM1L1Q5H9M0 696 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 MCTP2Q6DN12 878 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 PSD3Q9NYI0 1048 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 ERICH4A6NGS2 130 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 ADCY5O95622 1261 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 LMNAP02545 664 aaKnown RBP6.97□□□□□ -1.29
LINC02397-201ENST00000504409 SMC1BQ8NDV3 1235 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 LRRC45Q96CN5 670 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 CCDC51Q96ER9 411 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 TAF4BQ92750 862 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 TUBB6Q9BUF5 446 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 SYNMO15061 1565 aa6.97□□□□□ -1.29
LINC02397-201ENST00000504409 CCAR1Q8IX12 1150 aaKnown RBP6.97□□□□□ -1.29
LINC02397-201ENST00000504409 TTF2Q9UNY4 1162 aaKnown RBP6.97□□□□□ -1.29
LINC02397-201ENST00000504409 SPA17Q15506 151 aa6.96□□□□□ -1.29
LINC02397-201ENST00000504409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.96□□□□□ -1.29
LINC02397-201ENST00000504409 GOLGA8KD6RF30 607 aa6.96□□□□□ -1.29
LINC02397-201ENST00000504409 STMN1P16949 149 aa6.96□□□□□ -1.29
LINC02397-201ENST00000504409 HMGB2P26583 209 aaKnown RBP6.96□□□□□ -1.29
LINC02397-201ENST00000504409 THOC1Q96FV9 657 aaKnown RBP6.96□□□□□ -1.29
LINC02397-201ENST00000504409 FKBP5Q13451 457 aaPredicted RBP6.96□□□□□ -1.29
LINC02397-201ENST00000504409 CABS1Q96KC9 395 aa6.96□□□□□ -1.29
LINC02397-201ENST00000504409 NRDE2Q9H7Z3 1164 aa6.96□□□□□ -1.29
LINC02397-201ENST00000504409 ANAPC4Q9UJX5 808 aa6.96□□□□□ -1.29
LINC02397-201ENST00000504409 PCF11O94913 1555 aaKnown RBP6.96□□□□□ -1.3
LINC02397-201ENST00000504409 HNRNPCL1O60812 293 aaKnown RBP6.96□□□□□ -1.3
LINC02397-201ENST00000504409 CCDC155Q8N6L0 562 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 CTNNBL1Q8WYA6 563 aaPredicted RBP6.96□□□□□ -1.3
LINC02397-201ENST00000504409 EIF2AQ9BY44 585 aaKnown RBP6.96□□□□□ -1.3
LINC02397-201ENST00000504409 ERBINQ96RT1 1412 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 RMND1Q9NWS8 449 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 ENO4A6NNW6 628 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 CEP85LQ5SZL2 805 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 CCDC129Q6ZRS4 1044 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 CHD1LQ86WJ1 897 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 STAG1Q8WVM7 1258 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 AMOTL1Q8IY63 956 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 ZNF280CQ8ND82 737 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 PUS7Q96PZ0 661 aaKnown RBP6.96□□□□□ -1.3
LINC02397-201ENST00000504409 MTUS1Q9ULD2 1270 aa6.96□□□□□ -1.3
LINC02397-201ENST00000504409 TTC41PQ6P2S7 1318 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TOP1P11387 765 aaKnown RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 CNGA4Q8IV77 575 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 UIMC1Q96RL1 719 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 PHLPP2Q6ZVD8 1323 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TRAF1Q13077 416 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 CTNNA3Q9UI47 895 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 AEBP2Q6ZN18 517 aaPredicted RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 SPRYD3Q8NCJ5 442 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TUBA8Q9NY65 449 aaPredicted RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 POGKQ9P215 609 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 EPS15P42566 896 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TMED8Q6PL24 325 aaPredicted RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TEX9Q8N6V9 391 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TBC1D31Q96DN5 1066 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 ERICH2A1L162 156 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 PPP1R12AO14974 1030 aaPredicted RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 MIS18AQ9NYP9 233 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 PRC1O43663 620 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 PPFIA2O75334 1257 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 MAP7D1Q3KQU3 841 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 CLEC17AQ6ZS10 378 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TAOK1Q7L7X3 1001 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 HOMER3Q9NSC5 361 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 SYCE3A1L190 88 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 DZIP1Q86YF9 867 aaKnown RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 LMBR1Q8WVP7 490 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
LINC02397-201ENST00000504409 ZNF131P52739 623 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 SMC6Q96SB8 1091 aa6.95□□□□□ -1.3
LINC02397-201ENST00000504409 SAMD9Q5K651 1589 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 ATXN2Q99700 1313 aaKnown RBP6.94□□□□□ -1.3
LINC02397-201ENST00000504409 U2AF1L5P0DN76 240 aaPredicted RBP6.94□□□□□ -1.3
LINC02397-201ENST00000504409 U2AF1Q01081 240 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC02397-201ENST00000504409 DDX58O95786 925 aaKnown RBP6.94□□□□□ -1.3
LINC02397-201ENST00000504409 SEMA3FQ13275 785 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 ZSCAN26Q16670 478 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 ATF7IPQ6VMQ6 1270 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 CCDC77Q9BR77 488 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 TBC1D2Q9BYX2 928 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 RUNDC3BQ96NL0 473 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 JRKLQ9Y4A0 524 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 DNMT1P26358 1616 aaKnown RBP6.94□□□□□ -1.3
LINC02397-201ENST00000504409 ASXL2Q76L83 1435 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 PARD3Q8TEW0 1356 aa6.94□□□□□ -1.3
LINC02397-201ENST00000504409 PSDA5PKW4 1024 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms