RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HSP90AB3PQ58FF7 597 aa25.48■■□□□ 1.67
CTSD-206ENST00000497544 MAP3K2Q9Y2U5 619 aa25.48■■□□□ 1.67
CTSD-206ENST00000497544 NUP98P52948 1817 aa25.47■■□□□ 1.67
CTSD-206ENST00000497544 A0A0G2JLW4 131 aa25.47■■□□□ 1.67
CTSD-206ENST00000497544 FRAT1Q92837 279 aaPredicted RBP25.47■■□□□ 1.67
CTSD-206ENST00000497544 TCIRG1Q13488 830 aa25.46■■□□□ 1.67
CTSD-206ENST00000497544 BICDL1Q6ZP65 573 aa25.46■■□□□ 1.67
CTSD-206ENST00000497544 SBF1O95248 1867 aa25.46■■□□□ 1.67
CTSD-206ENST00000497544 TGFB2P61812 414 aa25.45■■□□□ 1.66
CTSD-206ENST00000497544 FAM161AQ3B820 660 aa25.45■■□□□ 1.66
CTSD-206ENST00000497544 TBC1D9BQ66K14 1250 aa25.45■■□□□ 1.66
CTSD-206ENST00000497544 DNAAF4Q8WXU2 420 aa25.45■■□□□ 1.66
CTSD-206ENST00000497544 SETDB2Q96T68 719 aa25.45■■□□□ 1.66
CTSD-206ENST00000497544 NIP7Q9Y221 180 aaKnown RBP eCLIP25.45■■□□□ 1.66
CTSD-206ENST00000497544 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
CTSD-206ENST00000497544 F6X3S4 739 aa25.44■■□□□ 1.66
CTSD-206ENST00000497544 NEXNQ0ZGT2 675 aa25.44■■□□□ 1.66
CTSD-206ENST00000497544 ARHGAP45Q92619 1136 aa25.44■■□□□ 1.66
CTSD-206ENST00000497544 METTL22Q9BUU2 404 aaPredicted RBP25.44■■□□□ 1.66
CTSD-206ENST00000497544 API5Q9BZZ5 524 aaKnown RBP25.44■■□□□ 1.66
CTSD-206ENST00000497544 NFIXQ14938 502 aa25.43■■□□□ 1.66
CTSD-206ENST00000497544 MYD88Q99836 296 aa25.43■■□□□ 1.66
CTSD-206ENST00000497544 SCN7AQ01118 1682 aa25.42■■□□□ 1.66
CTSD-206ENST00000497544 MMP10P09238 476 aa25.42■■□□□ 1.66
CTSD-206ENST00000497544 GPTP24298 496 aa25.42■■□□□ 1.66
CTSD-206ENST00000497544 TM4SF1P30408 202 aa25.42■■□□□ 1.66
CTSD-206ENST00000497544 ZKSCAN2Q63HK3 967 aa25.42■■□□□ 1.66
CTSD-206ENST00000497544 SLC4A10Q6U841 1118 aa25.42■■□□□ 1.66
CTSD-206ENST00000497544 ZNF34Q8IZ26 560 aa25.41■■□□□ 1.66
CTSD-206ENST00000497544 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
CTSD-206ENST00000497544 ATP5J2-PTCD1G3V325 749 aa25.4■■□□□ 1.66
CTSD-206ENST00000497544 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.4■■□□□ 1.66
CTSD-206ENST00000497544 ARFGEF2Q9Y6D5 1785 aa25.4■■□□□ 1.66
CTSD-206ENST00000497544 DPEP1P16444 411 aa25.39■■□□□ 1.66
CTSD-206ENST00000497544 PARP10Q53GL7 1025 aa25.39■■□□□ 1.66
CTSD-206ENST00000497544 ATF7IPQ6VMQ6 1270 aa25.39■■□□□ 1.66
CTSD-206ENST00000497544 ISCA1Q9BUE6 129 aa25.38■■□□□ 1.65
CTSD-206ENST00000497544 RNF181Q9P0P0 153 aa25.38■■□□□ 1.65
CTSD-206ENST00000497544 FAM177BA6PVY3 158 aa25.37■■□□□ 1.65
CTSD-206ENST00000497544 SERPINB2P05120 415 aa25.37■■□□□ 1.65
CTSD-206ENST00000497544 TRIM28Q13263 835 aaKnown RBP25.37■■□□□ 1.65
CTSD-206ENST00000497544 PPP1R42Q7Z4L9 355 aa25.37■■□□□ 1.65
CTSD-206ENST00000497544 NPHP1O15259 732 aa25.36■■□□□ 1.65
CTSD-206ENST00000497544 FOXN1O15353 648 aa25.36■■□□□ 1.65
CTSD-206ENST00000497544 NLRP10Q86W26 655 aa25.36■■□□□ 1.65
CTSD-206ENST00000497544 LINS1Q8NG48 757 aa25.36■■□□□ 1.65
CTSD-206ENST00000497544 CARMIL3Q8ND23 1372 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 POLRMTO00411 1230 aaKnown RBP25.35■■□□□ 1.65
CTSD-206ENST00000497544 TRIM27P14373 513 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 GTF2E1P29083 439 aaPredicted RBP25.35■■□□□ 1.65
CTSD-206ENST00000497544 DDR1Q08345 913 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 BEND3Q5T5X7 828 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 SUSD4Q5VX71 490 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 TPTE2Q6XPS3 522 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 NBPF5PQ86XG9 351 aaPredicted RBP25.35■■□□□ 1.65
CTSD-206ENST00000497544 CCDC191Q8NCU4 936 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 UBN2Q6ZU65 1347 aa25.35■■□□□ 1.65
CTSD-206ENST00000497544 ANKRD36CQ5JPF3 1778 aa25.34■■□□□ 1.65
CTSD-206ENST00000497544 IGKV5-2P06315 115 aa25.34■■□□□ 1.65
CTSD-206ENST00000497544 MS4A1P11836 297 aa25.34■■□□□ 1.65
CTSD-206ENST00000497544 SRCIN1Q9C0H9 1055 aa25.34■■□□□ 1.65
CTSD-206ENST00000497544 NYXQ9GZU5 481 aa25.34■■□□□ 1.65
CTSD-206ENST00000497544 PRDM10Q9NQV6 1147 aa25.34■■□□□ 1.65
CTSD-206ENST00000497544 CWC25Q9NXE8 425 aaPredicted RBP25.34■■□□□ 1.65
CTSD-206ENST00000497544 NEURL1BA8MQ27 555 aa25.33■■□□□ 1.65
CTSD-206ENST00000497544 PLIN1O60240 522 aa25.33■■□□□ 1.65
CTSD-206ENST00000497544 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
CTSD-206ENST00000497544 CWF19L2Q2TBE0 894 aaKnown RBP25.33■■□□□ 1.65
CTSD-206ENST00000497544 FTSJ3Q8IY81 847 aaKnown RBP25.33■■□□□ 1.65
CTSD-206ENST00000497544 UTP14AQ9BVJ6 771 aaKnown RBP25.33■■□□□ 1.65
CTSD-206ENST00000497544 KCNA3P22001 575 aa25.32■■□□□ 1.64
CTSD-206ENST00000497544 CCT4P50991 539 aaKnown RBP25.32■■□□□ 1.64
CTSD-206ENST00000497544 DZIP1LQ8IYY4 767 aaKnown RBP25.32■■□□□ 1.64
CTSD-206ENST00000497544 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
CTSD-206ENST00000497544 TNNQ9UQP3 1299 aa25.32■■□□□ 1.64
CTSD-206ENST00000497544 ALDH1L1O75891 902 aa25.31■■□□□ 1.64
CTSD-206ENST00000497544 CNBD1Q8NA66 436 aa25.3■■□□□ 1.64
CTSD-206ENST00000497544 AFDNP55196 1824 aaKnown RBP25.3■■□□□ 1.64
CTSD-206ENST00000497544 GCKRQ14397 625 aa25.29■■□□□ 1.64
CTSD-206ENST00000497544 ABCC4O15439 1325 aa25.29■■□□□ 1.64
CTSD-206ENST00000497544 ST5P78524 1137 aa25.28■■□□□ 1.64
CTSD-206ENST00000497544 INTS3Q68E01 1043 aaKnown RBP25.28■■□□□ 1.64
CTSD-206ENST00000497544 SUPT16HQ9Y5B9 1047 aaKnown RBP25.28■■□□□ 1.64
CTSD-206ENST00000497544 NTSR2O95665 410 aa25.27■■□□□ 1.64
CTSD-206ENST00000497544 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
CTSD-206ENST00000497544 PRR5LQ6MZQ0 368 aa25.27■■□□□ 1.64
CTSD-206ENST00000497544 NUTM1Q86Y26 1132 aa25.27■■□□□ 1.64
CTSD-206ENST00000497544 ZBTB38Q8NAP3 1195 aaPredicted RBP25.27■■□□□ 1.64
CTSD-206ENST00000497544 C9orf78Q9NZ63 289 aaPredicted RBP25.27■■□□□ 1.64
CTSD-206ENST00000497544 MKRN1Q9UHC7 482 aaKnown RBP25.27■■□□□ 1.64
CTSD-206ENST00000497544 PCCAP05165 728 aaPredicted RBP25.26■■□□□ 1.63
CTSD-206ENST00000497544 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
CTSD-206ENST00000497544 CCDC24Q8N4L8 307 aa25.26■■□□□ 1.63
CTSD-206ENST00000497544 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
CTSD-206ENST00000497544 RNF123Q5XPI4 1314 aa25.26■■□□□ 1.63
CTSD-206ENST00000497544 SH3TC1Q8TE82 1336 aa25.26■■□□□ 1.63
CTSD-206ENST00000497544 IBTKQ9P2D0 1353 aaPredicted RBP25.26■■□□□ 1.63
CTSD-206ENST00000497544 VEGFAP15692 232 aaPredicted RBP25.25■■□□□ 1.63
CTSD-206ENST00000497544 PDE3AQ14432 1141 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms