RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
ATG4B-224ENST00000494132 PLBD2Q8NHP8 589 aa18.99■□□□□ 0.63
ATG4B-224ENST00000494132 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
ATG4B-224ENST00000494132 RNF181Q9P0P0 153 aa18.99■□□□□ 0.63
ATG4B-224ENST00000494132 CACNA1FO60840 1977 aa18.99■□□□□ 0.63
ATG4B-224ENST00000494132 ATP5J2-PTCD1G3V325 749 aa18.98■□□□□ 0.63
ATG4B-224ENST00000494132 TCIRG1Q13488 830 aa18.98■□□□□ 0.63
ATG4B-224ENST00000494132 TWISTNBQ3B726 338 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-224ENST00000494132 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
ATG4B-224ENST00000494132 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
ATG4B-224ENST00000494132 NLRP10Q86W26 655 aa18.98■□□□□ 0.63
ATG4B-224ENST00000494132 SYNE4Q8N205 404 aa18.98■□□□□ 0.63
ATG4B-224ENST00000494132 UTP14AQ9BVJ6 771 aaKnown RBP18.98■□□□□ 0.63
ATG4B-224ENST00000494132 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-224ENST00000494132 NFKBIEO00221 500 aa18.97■□□□□ 0.63
ATG4B-224ENST00000494132 NPR1P16066 1061 aa18.97■□□□□ 0.63
ATG4B-224ENST00000494132 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
ATG4B-224ENST00000494132 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
ATG4B-224ENST00000494132 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
ATG4B-224ENST00000494132 GPBP1L1Q9HC44 474 aaPredicted RBP18.96■□□□□ 0.63
ATG4B-224ENST00000494132 EXOSC9Q06265 439 aaKnown RBP18.95■□□□□ 0.62
ATG4B-224ENST00000494132 GOLGA2Q08379 1002 aa18.95■□□□□ 0.62
ATG4B-224ENST00000494132 RIC3Q7Z5B4 369 aa18.95■□□□□ 0.62
ATG4B-224ENST00000494132 SLC51AQ86UW1 340 aa18.95■□□□□ 0.62
ATG4B-224ENST00000494132 TRMT112Q9UI30 125 aaKnown RBP18.95■□□□□ 0.62
ATG4B-224ENST00000494132 RIC1Q4ADV7 1423 aa18.94■□□□□ 0.62
ATG4B-224ENST00000494132 HCLS1P14317 486 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-224ENST00000494132 CRY2Q49AN0 593 aa18.94■□□□□ 0.62
ATG4B-224ENST00000494132 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-224ENST00000494132 RPGRQ92834 1020 aaKnown RBP18.94■□□□□ 0.62
ATG4B-224ENST00000494132 G2E3Q7L622 706 aa18.93■□□□□ 0.62
ATG4B-224ENST00000494132 MYD88Q99836 296 aa18.93■□□□□ 0.62
ATG4B-224ENST00000494132 ISCA1Q9BUE6 129 aa18.93■□□□□ 0.62
ATG4B-224ENST00000494132 LMNB1P20700 586 aa18.92■□□□□ 0.62
ATG4B-224ENST00000494132 STK31Q9BXU1 1019 aa18.92■□□□□ 0.62
ATG4B-224ENST00000494132 CCER2I3L3R5 266 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 ALDH1B1P30837 517 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 FAM89AQ96GI7 184 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 NLRP3Q96P20 1036 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 TAOK3Q9H2K8 898 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 SH3TC1Q8TE82 1336 aa18.91■□□□□ 0.62
ATG4B-224ENST00000494132 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
ATG4B-224ENST00000494132 SLC10A5Q5PT55 438 aa18.9■□□□□ 0.62
ATG4B-224ENST00000494132 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
ATG4B-224ENST00000494132 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
ATG4B-224ENST00000494132 ZNF521Q96K83 1311 aa18.9■□□□□ 0.62
ATG4B-224ENST00000494132 VAMP4O75379 141 aa18.89■□□□□ 0.61
ATG4B-224ENST00000494132 CCDC93Q567U6 631 aa18.89■□□□□ 0.61
ATG4B-224ENST00000494132 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-224ENST00000494132 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.61
ATG4B-224ENST00000494132 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.61
ATG4B-224ENST00000494132 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.61
ATG4B-224ENST00000494132 RNF123Q5XPI4 1314 aa18.89■□□□□ 0.61
ATG4B-224ENST00000494132 COL4A1P02462 1669 aa18.89■□□□□ 0.61
ATG4B-224ENST00000494132 MYH3P11055 1940 aa18.88■□□□□ 0.61
ATG4B-224ENST00000494132 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
ATG4B-224ENST00000494132 DDX58O95786 925 aaKnown RBP18.88■□□□□ 0.61
ATG4B-224ENST00000494132 HOXA10P31260 410 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-224ENST00000494132 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
ATG4B-224ENST00000494132 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
ATG4B-224ENST00000494132 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
ATG4B-224ENST00000494132 ABCC4O15439 1325 aa18.87■□□□□ 0.61
ATG4B-224ENST00000494132 MIER1Q8N108 512 aa18.87■□□□□ 0.61
ATG4B-224ENST00000494132 METTL22Q9BUU2 404 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-224ENST00000494132 LTBP3Q9NS15 1303 aa18.86■□□□□ 0.61
ATG4B-224ENST00000494132 PPEF1O14829 653 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-224ENST00000494132 KSR2Q6VAB6 950 aa18.86■□□□□ 0.61
ATG4B-224ENST00000494132 CRAMP1Q96RY5 1269 aa18.86■□□□□ 0.61
ATG4B-224ENST00000494132 ZNF277Q9NRM2 450 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-224ENST00000494132 SPEF2Q9C093 1822 aa18.86■□□□□ 0.61
ATG4B-224ENST00000494132 SNED1Q8TER0 1413 aa18.85■□□□□ 0.61
ATG4B-224ENST00000494132 KIF3CO14782 793 aa18.85■□□□□ 0.61
ATG4B-224ENST00000494132 C1QTNF8P60827 252 aa18.85■□□□□ 0.61
ATG4B-224ENST00000494132 FLIIQ13045 1269 aa18.85■□□□□ 0.61
ATG4B-224ENST00000494132 IRS4O14654 1257 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-224ENST00000494132 FKBP4Q02790 459 aaKnown RBP eCLIP18.84■□□□□ 0.61
ATG4B-224ENST00000494132 TRIM28Q13263 835 aaKnown RBP18.84■□□□□ 0.61
ATG4B-224ENST00000494132 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-224ENST00000494132 IGKV5-2P06315 115 aa18.83■□□□□ 0.6
ATG4B-224ENST00000494132 CWF19L2Q2TBE0 894 aaKnown RBP18.83■□□□□ 0.6
ATG4B-224ENST00000494132 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.6
ATG4B-224ENST00000494132 CCDC191Q8NCU4 936 aa18.83■□□□□ 0.6
ATG4B-224ENST00000494132 CDCA7LQ96GN5 454 aa18.83■□□□□ 0.6
ATG4B-224ENST00000494132 RRAGCQ9HB90 399 aa18.83■□□□□ 0.6
ATG4B-224ENST00000494132 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-224ENST00000494132 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
ATG4B-224ENST00000494132 RTKN2Q8IZC4 609 aa18.82■□□□□ 0.6
ATG4B-224ENST00000494132 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-224ENST00000494132 LRRC37AA6NMS7 1700 aa18.82■□□□□ 0.6
ATG4B-224ENST00000494132 COL4A5P29400 1685 aa18.82■□□□□ 0.6
ATG4B-224ENST00000494132 ZC3H4Q9UPT8 1303 aaKnown RBP18.81■□□□□ 0.6
ATG4B-224ENST00000494132 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-224ENST00000494132 F6X3S4 739 aa18.8■□□□□ 0.6
ATG4B-224ENST00000494132 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-224ENST00000494132 IARSP41252 1262 aaKnown RBP18.8■□□□□ 0.6
ATG4B-224ENST00000494132 NEXNQ0ZGT2 675 aa18.8■□□□□ 0.6
ATG4B-224ENST00000494132 GRAPQ13588 217 aa18.8■□□□□ 0.6
ATG4B-224ENST00000494132 GRAPLQ8TC17 118 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-224ENST00000494132 CELF1Q92879 486 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms