RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 TPM2P07951 284 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
TSC1-207ENST00000493467 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
TSC1-207ENST00000493467 ADCY9O60503 1353 aa11.69□□□□□ -0.54
TSC1-207ENST00000493467 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
TSC1-207ENST00000493467 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
TSC1-207ENST00000493467 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
TSC1-207ENST00000493467 TTC14Q96N46 770 aa11.69□□□□□ -0.54
TSC1-207ENST00000493467 LSG1Q9H089 658 aaKnown RBP11.69□□□□□ -0.54
TSC1-207ENST00000493467 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
TSC1-207ENST00000493467 NSFL1CQ9UNZ2 370 aaKnown RBP11.69□□□□□ -0.54
TSC1-207ENST00000493467 UNCXA6NJT0 531 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 MSNP26038 577 aaKnown RBP11.68□□□□□ -0.54
TSC1-207ENST00000493467 NUTM2GQ5VZR2 741 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 NOL7Q9UMY1 257 aaKnown RBP11.68□□□□□ -0.54
TSC1-207ENST00000493467 SYCE3A1L190 88 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 GRXCR2A6NFK2 248 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 ZNF500O60304 480 aaPredicted RBP11.68□□□□□ -0.54
TSC1-207ENST00000493467 OFD1O75665 1012 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 TERF1P54274 439 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 AKAP4Q5JQC9 854 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 USHBP1Q8N6Y0 703 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 LTV1Q96GA3 475 aaPredicted RBP11.68□□□□□ -0.54
TSC1-207ENST00000493467 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
TSC1-207ENST00000493467 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 MCM5P33992 734 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
TSC1-207ENST00000493467 FAM177A1Q8N128 213 aaPredicted RBP11.67□□□□□ -0.54
TSC1-207ENST00000493467 UPF3BQ9BZI7 483 aaKnown RBP11.67□□□□□ -0.54
TSC1-207ENST00000493467 ALDH1L1O75891 902 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 GLRX3O76003 335 aaKnown RBP11.67□□□□□ -0.54
TSC1-207ENST00000493467 PHF14O94880 888 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 NBPF7P0C2Y1 421 aaPredicted RBP11.67□□□□□ -0.54
TSC1-207ENST00000493467 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 CHAMP1Q96JM3 812 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
TSC1-207ENST00000493467 PXDNQ92626 1479 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 PI4KAP2A4QPH2 592 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 PI4KAP1Q8N8J0 262 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
TSC1-207ENST00000493467 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 KCNB2Q92953 911 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 TSPY26PQ9H489 355 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 LGR6Q9HBX8 967 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
TSC1-207ENST00000493467 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 AMOTQ4VCS5 1084 aa11.65□□□□□ -0.54
TSC1-207ENST00000493467 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
TSC1-207ENST00000493467 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 CCDC39Q9UFE4 941 aa11.65□□□□□ -0.54
TSC1-207ENST00000493467 TRPM3Q9HCF6 1732 aaPredicted RBP11.65□□□□□ -0.54
TSC1-207ENST00000493467 MRC1P22897 1456 aa11.65□□□□□ -0.55
TSC1-207ENST00000493467 TEFQ10587 303 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 PLEKHO1Q53GL0 409 aaPredicted RBP11.64□□□□□ -0.55
TSC1-207ENST00000493467 ERC1Q8IUD2 1116 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 RUFY2Q8WXA3 655 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 LIMCH1Q9UPQ0 1083 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 ZKSCAN5Q9Y2L8 839 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
TSC1-207ENST00000493467 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 ZNF530Q6P9A1 599 aaPredicted RBP11.64□□□□□ -0.55
TSC1-207ENST00000493467 CALR3Q96L12 384 aaKnown RBP11.64□□□□□ -0.55
TSC1-207ENST00000493467 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
TSC1-207ENST00000493467 SPDYE16A6NNV3 312 aaPredicted RBP11.63□□□□□ -0.55
TSC1-207ENST00000493467 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
TSC1-207ENST00000493467 ZSCAN22P10073 491 aaPredicted RBP11.63□□□□□ -0.55
TSC1-207ENST00000493467 AK2P54819 239 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 KCNA1Q09470 495 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 UVSSAQ2YD98 709 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 FAM184AQ8NB25 1140 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 UTYO14607 1347 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 KCNQ3O43525 872 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
TSC1-207ENST00000493467 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
TSC1-207ENST00000493467 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
TSC1-207ENST00000493467 ABCC6O95255 1503 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
TSC1-207ENST00000493467 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 POM121CA8CG34 1229 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 STX6O43752 255 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
TSC1-207ENST00000493467 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
TSC1-207ENST00000493467 HIC1Q14526 733 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms