RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
SSR4-211ENST00000486204 PDE6BP35913 854 aa16.75■□□□□ 0.27
SSR4-211ENST00000486204 PDIA6Q15084 440 aa16.75■□□□□ 0.27
SSR4-211ENST00000486204 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SSR4-211ENST00000486204 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
SSR4-211ENST00000486204 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
SSR4-211ENST00000486204 DUSP27Q5VZP5 1158 aa16.74■□□□□ 0.27
SSR4-211ENST00000486204 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
SSR4-211ENST00000486204 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
SSR4-211ENST00000486204 A0A087WZG4 1122 aa16.73■□□□□ 0.27
SSR4-211ENST00000486204 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
SSR4-211ENST00000486204 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
SSR4-211ENST00000486204 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
SSR4-211ENST00000486204 ZNF330Q9Y3S2 320 aaPredicted RBP16.73■□□□□ 0.27
SSR4-211ENST00000486204 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
SSR4-211ENST00000486204 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
SSR4-211ENST00000486204 PROSER3Q2NL68 480 aa16.72■□□□□ 0.27
SSR4-211ENST00000486204 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
SSR4-211ENST00000486204 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
SSR4-211ENST00000486204 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
SSR4-211ENST00000486204 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
SSR4-211ENST00000486204 HDGFL1Q5TGJ6 251 aa16.71■□□□□ 0.27
SSR4-211ENST00000486204 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
SSR4-211ENST00000486204 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
SSR4-211ENST00000486204 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
SSR4-211ENST00000486204 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
SSR4-211ENST00000486204 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
SSR4-211ENST00000486204 CACNA1SQ13698 1873 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 ANXA1P04083 346 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 MYL6BP14649 208 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 EPHX2P34913 555 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
SSR4-211ENST00000486204 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 SCN4AP35499 1836 aa16.7■□□□□ 0.26
SSR4-211ENST00000486204 ELL2O00472 640 aaPredicted RBP16.69■□□□□ 0.26
SSR4-211ENST00000486204 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
SSR4-211ENST00000486204 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
SSR4-211ENST00000486204 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
SSR4-211ENST00000486204 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSR4-211ENST00000486204 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
SSR4-211ENST00000486204 ECE1P42892 770 aa16.68■□□□□ 0.26
SSR4-211ENST00000486204 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
SSR4-211ENST00000486204 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
SSR4-211ENST00000486204 CAPNS2Q96L46 248 aa16.68■□□□□ 0.26
SSR4-211ENST00000486204 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
SSR4-211ENST00000486204 LAMB2P55268 1798 aa16.68■□□□□ 0.26
SSR4-211ENST00000486204 RGL2O15211 777 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 GRM1Q13255 1194 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
SSR4-211ENST00000486204 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 MCOLN1Q9GZU1 580 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 MAP3K15Q6ZN16 1313 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
SSR4-211ENST00000486204 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
SSR4-211ENST00000486204 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
SSR4-211ENST00000486204 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
SSR4-211ENST00000486204 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
SSR4-211ENST00000486204 HLFQ16534 295 aa16.65■□□□□ 0.26
SSR4-211ENST00000486204 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
SSR4-211ENST00000486204 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
SSR4-211ENST00000486204 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
SSR4-211ENST00000486204 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
SSR4-211ENST00000486204 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
SSR4-211ENST00000486204 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 E9PSI1 815 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 NPHP1O15259 732 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 VAMP4O75379 141 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 SRGNP10124 158 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
SSR4-211ENST00000486204 XAGE3Q8WTP9 111 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
SSR4-211ENST00000486204 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
SSR4-211ENST00000486204 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
SSR4-211ENST00000486204 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
SSR4-211ENST00000486204 ZBTB3Q9H5J0 574 aa16.63■□□□□ 0.25
SSR4-211ENST00000486204 ZNF277Q9NRM2 450 aaPredicted RBP16.63■□□□□ 0.25
SSR4-211ENST00000486204 ADAMTSL1Q8N6G6 1762 aa16.63■□□□□ 0.25
SSR4-211ENST00000486204 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
SSR4-211ENST00000486204 ST5P78524 1137 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSR4-211ENST00000486204 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSR4-211ENST00000486204 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 HYPKQ9NX55 129 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 ZNF652Q9Y2D9 606 aa16.62■□□□□ 0.25
SSR4-211ENST00000486204 MYH3P11055 1940 aa16.61■□□□□ 0.25
SSR4-211ENST00000486204 MAP2K2P36507 400 aa16.61■□□□□ 0.25
SSR4-211ENST00000486204 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSR4-211ENST00000486204 GIGYF2Q6Y7W6 1299 aaKnown RBP16.61■□□□□ 0.25
SSR4-211ENST00000486204 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
SSR4-211ENST00000486204 TNRC18O15417 2968 aaPredicted RBP16.6■□□□□ 0.25
SSR4-211ENST00000486204 FZD9O00144 591 aa16.6■□□□□ 0.25
SSR4-211ENST00000486204 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
SSR4-211ENST00000486204 CA12O43570 354 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms