RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KIF13BQ9NQT8 1826 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 PXDNLA1KZ92 1463 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 ATP5J2-PTCD1G3V325 749 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 PTGER2P43116 358 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 ST5P78524 1137 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 DDR1Q08345 913 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 TPTE2Q6XPS3 522 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 LAMB2P55268 1798 aa14.45□□□□□ -0.1
NUP50-216ENST00000486184 F6X3S4 739 aa14.44□□□□□ -0.1
NUP50-216ENST00000486184 ZKSCAN2Q63HK3 967 aa14.44□□□□□ -0.1
NUP50-216ENST00000486184 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.44□□□□□ -0.1
NUP50-216ENST00000486184 ARHGAP45Q92619 1136 aa14.44□□□□□ -0.1
NUP50-216ENST00000486184 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
NUP50-216ENST00000486184 IBTKQ9P2D0 1353 aaPredicted RBP14.44□□□□□ -0.1
NUP50-216ENST00000486184 UBN2Q6ZU65 1347 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 MYH3P11055 1940 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 NLRP10Q86W26 655 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 CCDC191Q8NCU4 936 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 LINS1Q8NG48 757 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 ISCA1Q9BUE6 129 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 UTP14AQ9BVJ6 771 aaKnown RBP14.43□□□□□ -0.1
NUP50-216ENST00000486184 CWC25Q9NXE8 425 aaPredicted RBP14.43□□□□□ -0.1
NUP50-216ENST00000486184 TRMT112Q9UI30 125 aaKnown RBP14.43□□□□□ -0.1
NUP50-216ENST00000486184 ANKRD31Q8N7Z5 1873 aa14.43□□□□□ -0.1
NUP50-216ENST00000486184 RNF123Q5XPI4 1314 aa14.42□□□□□ -0.1
NUP50-216ENST00000486184 SUSD4Q5VX71 490 aa14.42□□□□□ -0.1
NUP50-216ENST00000486184 ATF7IPQ6VMQ6 1270 aa14.42□□□□□ -0.1
NUP50-216ENST00000486184 FTSJ3Q8IY81 847 aaKnown RBP14.42□□□□□ -0.1
NUP50-216ENST00000486184 SRCIN1Q9C0H9 1055 aa14.42□□□□□ -0.1
NUP50-216ENST00000486184 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
NUP50-216ENST00000486184 NEURL1BA8MQ27 555 aa14.41□□□□□ -0.1
NUP50-216ENST00000486184 MS4A1P11836 297 aa14.41□□□□□ -0.1
NUP50-216ENST00000486184 TRIM28Q13263 835 aaKnown RBP14.41□□□□□ -0.1
NUP50-216ENST00000486184 CWF19L2Q2TBE0 894 aaKnown RBP14.41□□□□□ -0.1
NUP50-216ENST00000486184 PRR5LQ6MZQ0 368 aa14.41□□□□□ -0.1
NUP50-216ENST00000486184 CACNA1SQ13698 1873 aa14.41□□□□□ -0.1
NUP50-216ENST00000486184 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
NUP50-216ENST00000486184 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
NUP50-216ENST00000486184 DLEC1Q9Y238 1755 aa14.4□□□□□ -0.1
NUP50-216ENST00000486184 ALDH1L1O75891 902 aa14.4□□□□□ -0.1
NUP50-216ENST00000486184 NTSR2O95665 410 aa14.4□□□□□ -0.1
NUP50-216ENST00000486184 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
NUP50-216ENST00000486184 CCT4P50991 539 aaKnown RBP14.4□□□□□ -0.1
NUP50-216ENST00000486184 BEND3Q5T5X7 828 aa14.4□□□□□ -0.1
NUP50-216ENST00000486184 NUTM1Q86Y26 1132 aa14.4□□□□□ -0.1
NUP50-216ENST00000486184 IGKV5-2P06315 115 aa14.39□□□□□ -0.11
NUP50-216ENST00000486184 TRIM27P14373 513 aa14.39□□□□□ -0.11
NUP50-216ENST00000486184 ERFEQ4G0M1 354 aa14.39□□□□□ -0.11
NUP50-216ENST00000486184 CLUAP1Q96AJ1 413 aa14.39□□□□□ -0.11
NUP50-216ENST00000486184 C9orf78Q9NZ63 289 aaPredicted RBP14.39□□□□□ -0.11
NUP50-216ENST00000486184 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
NUP50-216ENST00000486184 TNRC6CQ9HCJ0 1690 aaKnown RBP14.39□□□□□ -0.11
NUP50-216ENST00000486184 PCCAP05165 728 aaPredicted RBP14.38□□□□□ -0.11
NUP50-216ENST00000486184 PDE6BP35913 854 aa14.38□□□□□ -0.11
NUP50-216ENST00000486184 GCKRQ14397 625 aa14.38□□□□□ -0.11
NUP50-216ENST00000486184 RTL5Q5HYW3 569 aaPredicted RBP14.38□□□□□ -0.11
NUP50-216ENST00000486184 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
NUP50-216ENST00000486184 CCDC24Q8N4L8 307 aa14.38□□□□□ -0.11
NUP50-216ENST00000486184 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
NUP50-216ENST00000486184 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
NUP50-216ENST00000486184 BRIP1Q9BX63 1249 aa14.38□□□□□ -0.11
NUP50-216ENST00000486184 FHDC1Q9C0D6 1143 aaPredicted RBP14.38□□□□□ -0.11
NUP50-216ENST00000486184 ABCC4O15439 1325 aa14.38□□□□□ -0.11
NUP50-216ENST00000486184 COL11A2P13942 1736 aaPredicted RBP14.38□□□□□ -0.11
NUP50-216ENST00000486184 UBE3BQ7Z3V4 1068 aa14.37□□□□□ -0.11
NUP50-216ENST00000486184 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
NUP50-216ENST00000486184 KIAA1551Q9HCM1 1747 aa14.37□□□□□ -0.11
NUP50-216ENST00000486184 ABCC12Q96J65 1359 aa14.36□□□□□ -0.11
NUP50-216ENST00000486184 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
NUP50-216ENST00000486184 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
NUP50-216ENST00000486184 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
NUP50-216ENST00000486184 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
NUP50-216ENST00000486184 H0YIN7 160 aa14.35□□□□□ -0.11
NUP50-216ENST00000486184 GRM8O00222 908 aa14.35□□□□□ -0.11
NUP50-216ENST00000486184 IRS4O14654 1257 aaPredicted RBP14.35□□□□□ -0.11
NUP50-216ENST00000486184 PLIN1O60240 522 aa14.35□□□□□ -0.11
NUP50-216ENST00000486184 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
NUP50-216ENST00000486184 TGFB2P61812 414 aa14.35□□□□□ -0.11
NUP50-216ENST00000486184 ITPRIPQ8IWB1 547 aa14.35□□□□□ -0.11
NUP50-216ENST00000486184 HCLS1P14317 486 aaPredicted RBP14.34□□□□□ -0.11
NUP50-216ENST00000486184 INTS3Q68E01 1043 aaKnown RBP14.34□□□□□ -0.11
NUP50-216ENST00000486184 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
NUP50-216ENST00000486184 JARID2Q92833 1246 aaPredicted RBP14.34□□□□□ -0.11
NUP50-216ENST00000486184 RPGRQ92834 1020 aaKnown RBP14.34□□□□□ -0.11
NUP50-216ENST00000486184 HDAC5Q9UQL6 1122 aa14.34□□□□□ -0.11
NUP50-216ENST00000486184 TNNQ9UQP3 1299 aa14.34□□□□□ -0.11
NUP50-216ENST00000486184 H7C1W4 665 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 PDE8AO60658 829 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 RRP1P56182 461 aaKnown RBP14.33□□□□□ -0.12
NUP50-216ENST00000486184 SLC10A5Q5PT55 438 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
NUP50-216ENST00000486184 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
NUP50-216ENST00000486184 UBTFL1P0CB47 393 aaPredicted RBP14.32□□□□□ -0.12
NUP50-216ENST00000486184 CHRNA5P30532 468 aa14.32□□□□□ -0.12
NUP50-216ENST00000486184 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
NUP50-216ENST00000486184 ZNF622Q969S3 477 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms