RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	ST18	O60284	1047 aa		11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	CYP2E1	P05181	493 aa	Predicted RBP	11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	PDIA4	P13667	645 aa	Known RBP	11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	TTC22	Q5TAA0	569 aa		11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	AK9	Q5TCS8	1911 aa		11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	PLEKHM2	Q8IWE5	1019 aa		11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	SIRT2	Q8IXJ6	389 aa		11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.11	□□□□□ -0.63
SH3YL1-222	ENST00000479739	HEG1	Q9ULI3	1381 aa		11.1	□□□□□ -0.63
SH3YL1-222	ENST00000479739	CRKL	P46109	303 aa	Known RBP	11.1	□□□□□ -0.63
SH3YL1-222	ENST00000479739	DNAJC10	Q8IXB1	793 aa		11.1	□□□□□ -0.63
SH3YL1-222	ENST00000479739	ZNF496	Q96IT1	587 aa	Predicted RBP	11.1	□□□□□ -0.63
SH3YL1-222	ENST00000479739	BTBD11	A6QL63	1104 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	RPS6KA4	O75676	772 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	CYP19A1	P11511	503 aa	Predicted RBP	11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	INTS5	Q6P9B9	1019 aa	Known RBP	11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	TTC5	Q8N0Z6	440 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	MBIP	Q9NS73	344 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	KCNQ3	O43525	872 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	PHF14	O94880	888 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	REC8	O95072	547 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	GSPT1	P15170	499 aa	Known RBP	11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	ADRA2B	P18089	450 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	USP26	Q9BXU7	913 aa		11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	RTCB	Q9Y3I0	505 aa	Known RBP	11.09	□□□□□ -0.63
SH3YL1-222	ENST00000479739	OFD1	O75665	1012 aa		11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	TAF7	Q15545	349 aa	Predicted RBP	11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	C1orf115	Q9H7X2	142 aa		11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ANKRD44	Q8N8A2	993 aa		11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	FMNL2	Q96PY5	1086 aa		11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	PDCL3	Q9H2J4	239 aa		11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.08	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MCM5	P33992	734 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	TSPYL6	Q8N831	410 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ARHGEF1	Q92888	912 aa	Known RBP	11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	THUMPD2	Q9BTF0	503 aa	Known RBP	11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	FOXD4L1	Q9NU39	408 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	CCDC87	Q9NVE4	849 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MCM2	P49736	904 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	TRAPPC3L	Q5T215	181 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MCTP1	Q6DN14	999 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	LMBRD1	Q9NUN5	540 aa		11.07	□□□□□ -0.64
SH3YL1-222	ENST00000479739	PTPRC	P08575	1304 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	SOS1	Q07889	1333 aa	Predicted RBP	11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	LAMB4	A4D0S4	1761 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	POLD1	P28340	1107 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ZSCAN23	Q3MJ62	389 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MSL1	Q68DK7	614 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	PDLIM2	Q96JY6	352 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MAP7D2	Q96T17	732 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ZBTB1	Q9Y2K1	713 aa		11.06	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ATP10D	Q9P241	1426 aa		11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ZNF500	O60304	480 aa	Predicted RBP	11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	KIAA1211	Q6ZU35	1233 aa		11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	NOL7	Q9UMY1	257 aa	Known RBP	11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	STARD3NL	O95772	234 aa		11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MBD3	O95983	291 aa		11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	RBM10	P98175	930 aa	Known RBP	11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	CSPP1	Q1MSJ5	1256 aa		11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MIS18A	Q9NYP9	233 aa		11.05	□□□□□ -0.64
SH3YL1-222	ENST00000479739	HMMR	O75330	724 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	GYS1	P13807	737 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	CAVIN1	Q6NZI2	390 aa	Known RBP	11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	SYT17	Q9BSW7	474 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	USP42	Q9H9J4	1324 aa	Known RBP	11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	PRAMEF22	A3QJZ6	481 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	RFC4	P35249	363 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	C8orf58	Q8NAV2	365 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	OSBPL3	Q9H4L5	887 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	COL15A1	P39059	1388 aa		11.04	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ERC2	O15083	957 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	SNRPA1	P09661	255 aa	Known RBP	11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	EIF5	P55010	431 aa	Known RBP	11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	BABAM1	Q9NWV8	329 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	USP16	Q9Y5T5	823 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	SCN7A	Q01118	1682 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	KIF13B	Q9NQT8	1826 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	NCL	P19338	710 aa	Known RBP	11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	SDS	P20132	328 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	EIF4A1	P60842	406 aa	Known RBP	11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	CEP85	Q6P2H3	762 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	LRSAM1	Q6UWE0	723 aa		11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	MTERF4	Q7Z6M4	381 aa	Known RBP	11.03	□□□□□ -0.64
SH3YL1-222	ENST00000479739	ELL2	O00472	640 aa	Predicted RBP	11.02	□□□□□ -0.65
SH3YL1-222	ENST00000479739	NLGN1	Q8N2Q7	840 aa		11.02	□□□□□ -0.65
SH3YL1-222	ENST00000479739	SRP68	Q9UHB9	627 aa	Known RBP	11.02	□□□□□ -0.65
SH3YL1-222	ENST00000479739	GIGYF1	O75420	1035 aa	Predicted RBP	11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	A1BG	P04217	495 aa		11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	IL6ST	P40189	918 aa	Predicted RBP	11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	SYAP1	Q96A49	352 aa	Predicted RBP	11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	CCDC39	Q9UFE4	941 aa		11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	BCOR	Q6W2J9	1755 aa		11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	EPB41L2	O43491	1005 aa	Known RBP	11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	MCC	P23508	829 aa		11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	KLHL34	Q8N239	644 aa		11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	NARF	Q9UHQ1	456 aa		11.01	□□□□□ -0.65
SH3YL1-222	ENST00000479739	CHL1	O00533	1208 aa		11	□□□□□ -0.65
SH3YL1-222	ENST00000479739	PRPF40A	O75400	957 aa	Known RBP	11	□□□□□ -0.65

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