RNA–Protein interactions for RNA: ENST00000476117.1

SRPK2-209, Transcript of SRSF protein kinase 2, humanhuman

TSL 2

Gene SRPK2, Length 703 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK2-209ENST00000476117 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
SRPK2-209ENST00000476117 PROSER3Q2NL68 480 aa11.71□□□□□ -0.53
SRPK2-209ENST00000476117 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
SRPK2-209ENST00000476117 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
SRPK2-209ENST00000476117 CHL1O00533 1208 aa11.7□□□□□ -0.54
SRPK2-209ENST00000476117 GTF2E1P29083 439 aaPredicted RBP11.7□□□□□ -0.54
SRPK2-209ENST00000476117 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
SRPK2-209ENST00000476117 PSMD1Q99460 953 aa11.7□□□□□ -0.54
SRPK2-209ENST00000476117 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
SRPK2-209ENST00000476117 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 ZNF541Q9H0D2 1346 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 ANXA1P04083 346 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
SRPK2-209ENST00000476117 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
SRPK2-209ENST00000476117 ZNF277Q9NRM2 450 aaPredicted RBP11.69□□□□□ -0.54
SRPK2-209ENST00000476117 FZD9O00144 591 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
SRPK2-209ENST00000476117 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
SRPK2-209ENST00000476117 IARSP41252 1262 aaKnown RBP11.68□□□□□ -0.54
SRPK2-209ENST00000476117 KRT24Q2M2I5 525 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 PPP1R42Q7Z4L9 355 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 CRAMP1Q96RY5 1269 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
SRPK2-209ENST00000476117 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
SRPK2-209ENST00000476117 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
SRPK2-209ENST00000476117 SLC51AQ86UW1 340 aa11.67□□□□□ -0.54
SRPK2-209ENST00000476117 SYNE4Q8N205 404 aa11.67□□□□□ -0.54
SRPK2-209ENST00000476117 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
SRPK2-209ENST00000476117 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
SRPK2-209ENST00000476117 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
SRPK2-209ENST00000476117 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
SRPK2-209ENST00000476117 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
SRPK2-209ENST00000476117 MYH3P11055 1940 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 HOXB7P09629 217 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
SRPK2-209ENST00000476117 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 COPS6Q7L5N1 327 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 NLRP10Q86W26 655 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 XAGE3Q8WTP9 111 aa11.66□□□□□ -0.54
SRPK2-209ENST00000476117 COL4A1P02462 1669 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 PASKQ96RG2 1323 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
SRPK2-209ENST00000476117 TCIRG1Q13488 830 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 NECTIN2Q92692 538 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
SRPK2-209ENST00000476117 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
SRPK2-209ENST00000476117 UTP14AQ9BVJ6 771 aaKnown RBP11.65□□□□□ -0.54
SRPK2-209ENST00000476117 ABCC4O15439 1325 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 GPC2Q8N158 579 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 NLRP3Q96P20 1036 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 CHPF2Q9P2E5 772 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 PSME4Q14997 1843 aa11.64□□□□□ -0.55
SRPK2-209ENST00000476117 ITGBL1O95965 494 aaPredicted RBP11.63□□□□□ -0.55
SRPK2-209ENST00000476117 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
SRPK2-209ENST00000476117 HDGFL1Q5TGJ6 251 aa11.63□□□□□ -0.55
SRPK2-209ENST00000476117 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
SRPK2-209ENST00000476117 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
SRPK2-209ENST00000476117 POLR2AP24928 1970 aaKnown RBP11.62□□□□□ -0.55
SRPK2-209ENST00000476117 THSD7BQ9C0I4 1608 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 EPHX2P34913 555 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 ISCA1Q9BUE6 129 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 RTFDC1Q9BY42 306 aaPredicted RBP11.62□□□□□ -0.55
SRPK2-209ENST00000476117 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 MBIPQ9NS73 344 aa11.62□□□□□ -0.55
SRPK2-209ENST00000476117 DBF4Q9UBU7 674 aaPredicted RBP11.62□□□□□ -0.55
SRPK2-209ENST00000476117 SH3TC1Q8TE82 1336 aa11.61□□□□□ -0.55
SRPK2-209ENST00000476117 SCN9AQ15858 1988 aa11.61□□□□□ -0.55
SRPK2-209ENST00000476117 HCLS1P14317 486 aaPredicted RBP11.61□□□□□ -0.55
SRPK2-209ENST00000476117 SCNN1DP51172 638 aa11.61□□□□□ -0.55
SRPK2-209ENST00000476117 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
SRPK2-209ENST00000476117 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 APAF1O14727 1248 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 EIF6P56537 245 aaKnown RBP11.6□□□□□ -0.55
SRPK2-209ENST00000476117 DUSP27Q5VZP5 1158 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 PNMA8AQ86V59 439 aaPredicted RBP11.6□□□□□ -0.55
SRPK2-209ENST00000476117 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 LARGE2Q8N3Y3 721 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 HYPKQ9NX55 129 aa11.6□□□□□ -0.55
SRPK2-209ENST00000476117 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
SRPK2-209ENST00000476117 ZNF646O15015 1829 aaPredicted RBP11.59□□□□□ -0.55
SRPK2-209ENST00000476117 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
SRPK2-209ENST00000476117 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
SRPK2-209ENST00000476117 BBOX1O75936 387 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms