RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 NBPF10Q6P3W6 841 aaKnown RBP27.24■■□□□ 1.95
HDAC11-217ENST00000475818 USP50Q70EL3 339 aaPredicted RBP27.24■■□□□ 1.95
HDAC11-217ENST00000475818 SLC51AQ86UW1 340 aa27.24■■□□□ 1.95
HDAC11-217ENST00000475818 NBPF15Q8N660 670 aa27.24■■□□□ 1.95
HDAC11-217ENST00000475818 ABCC12Q96J65 1359 aa27.23■■□□□ 1.95
HDAC11-217ENST00000475818 SNRPA1P09661 255 aaKnown RBP27.23■■□□□ 1.95
HDAC11-217ENST00000475818 COL3A1P02461 1466 aaPredicted RBP27.22■■□□□ 1.95
HDAC11-217ENST00000475818 CNGB1Q14028 1251 aaPredicted RBP27.22■■□□□ 1.95
HDAC11-217ENST00000475818 NUTM1Q86Y26 1132 aa27.22■■□□□ 1.95
HDAC11-217ENST00000475818 TCERG1O14776 1098 aaKnown RBP27.2■■□□□ 1.94
HDAC11-217ENST00000475818 CELF2O95319 508 aaKnown RBP27.2■■□□□ 1.94
HDAC11-217ENST00000475818 DGKZQ13574 1117 aa27.2■■□□□ 1.94
HDAC11-217ENST00000475818 CRY2Q49AN0 593 aa27.2■■□□□ 1.94
HDAC11-217ENST00000475818 CC2D2BQ6DHV5 1058 aa27.2■■□□□ 1.94
HDAC11-217ENST00000475818 PHACTR3Q96KR7 559 aa27.2■■□□□ 1.94
HDAC11-217ENST00000475818 SAPCD2Q86UD0 394 aa27.19■■□□□ 1.94
HDAC11-217ENST00000475818 CA12O43570 354 aa27.18■■□□□ 1.94
HDAC11-217ENST00000475818 NIM1KQ8IY84 436 aa27.18■■□□□ 1.94
HDAC11-217ENST00000475818 RPGRQ92834 1020 aaKnown RBP27.18■■□□□ 1.94
HDAC11-217ENST00000475818 TRPM7Q96QT4 1865 aa27.18■■□□□ 1.94
HDAC11-217ENST00000475818 RGL2O15211 777 aa27.17■■□□□ 1.94
HDAC11-217ENST00000475818 PRKAR2BP31323 418 aa27.16■■□□□ 1.94
HDAC11-217ENST00000475818 NGEFQ8N5V2 710 aa27.16■■□□□ 1.94
HDAC11-217ENST00000475818 GLIS2Q9BZE0 524 aaPredicted RBP27.16■■□□□ 1.94
HDAC11-217ENST00000475818 ZNF408Q9H9D4 720 aa27.16■■□□□ 1.94
HDAC11-217ENST00000475818 ADARB2Q9NS39 739 aaKnown RBP27.16■■□□□ 1.94
HDAC11-217ENST00000475818 BRPF1P55201 1214 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-217ENST00000475818 CIAPIN1Q6FI81 312 aa27.15■■□□□ 1.94
HDAC11-217ENST00000475818 MCM10Q7L590 875 aa27.15■■□□□ 1.94
HDAC11-217ENST00000475818 NYXQ9GZU5 481 aa27.15■■□□□ 1.94
HDAC11-217ENST00000475818 GPRC5DQ9NZD1 345 aa27.15■■□□□ 1.94
HDAC11-217ENST00000475818 PPIP5K2O43314 1243 aa27.14■■□□□ 1.94
HDAC11-217ENST00000475818 CASP8AP2Q9UKL3 1982 aa27.13■■□□□ 1.93
HDAC11-217ENST00000475818 PPEF1O14829 653 aaPredicted RBP27.13■■□□□ 1.93
HDAC11-217ENST00000475818 AOC3Q16853 763 aa27.13■■□□□ 1.93
HDAC11-217ENST00000475818 PER1O15534 1290 aaPredicted RBP27.12■■□□□ 1.93
HDAC11-217ENST00000475818 HOXA10P31260 410 aaPredicted RBP27.12■■□□□ 1.93
HDAC11-217ENST00000475818 KIF7Q2M1P5 1343 aa27.12■■□□□ 1.93
HDAC11-217ENST00000475818 GPTP24298 496 aa27.11■■□□□ 1.93
HDAC11-217ENST00000475818 GRIPAP1Q4V328 841 aa27.11■■□□□ 1.93
HDAC11-217ENST00000475818 RTF1Q92541 710 aaKnown RBP27.11■■□□□ 1.93
HDAC11-217ENST00000475818 RBM17Q96I25 401 aaKnown RBP27.11■■□□□ 1.93
HDAC11-217ENST00000475818 NPC1L1Q9UHC9 1359 aa27.1■■□□□ 1.93
HDAC11-217ENST00000475818 GMPSP49915 693 aaPredicted RBP27.1■■□□□ 1.93
HDAC11-217ENST00000475818 DCTN1Q14203 1278 aa27.1■■□□□ 1.93
HDAC11-217ENST00000475818 ZIC5Q96T25 663 aa27.1■■□□□ 1.93
HDAC11-217ENST00000475818 RSPH6AQ9H0K4 717 aa27.1■■□□□ 1.93
HDAC11-217ENST00000475818 HHIPL1Q96JK4 782 aa27.09■■□□□ 1.93
HDAC11-217ENST00000475818 RIC1Q4ADV7 1423 aa27.08■■□□□ 1.93
HDAC11-217ENST00000475818 CXCL9Q07325 125 aa27.08■■□□□ 1.93
HDAC11-217ENST00000475818 C3orf67Q6ZVT6 689 aa27.08■■□□□ 1.93
HDAC11-217ENST00000475818 CRAMP1Q96RY5 1269 aa27.08■■□□□ 1.93
HDAC11-217ENST00000475818 PCGF6Q9BYE7 350 aa27.07■■□□□ 1.92
HDAC11-217ENST00000475818 UBN2Q6ZU65 1347 aa27.07■■□□□ 1.92
HDAC11-217ENST00000475818 SOX10P56693 466 aa27.06■■□□□ 1.92
HDAC11-217ENST00000475818 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
HDAC11-217ENST00000475818 SUSD4Q5VX71 490 aa27.06■■□□□ 1.92
HDAC11-217ENST00000475818 MIS18AQ9NYP9 233 aa27.06■■□□□ 1.92
HDAC11-217ENST00000475818 ZNRF3Q9ULT6 936 aa27.06■■□□□ 1.92
HDAC11-217ENST00000475818 ERVV-1B6SEH8 477 aa27.05■■□□□ 1.92
HDAC11-217ENST00000475818 TTLL7Q6ZT98 887 aa27.05■■□□□ 1.92
HDAC11-217ENST00000475818 MAP3K15Q6ZN16 1313 aa27.05■■□□□ 1.92
HDAC11-217ENST00000475818 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
HDAC11-217ENST00000475818 PDE4DIPQ5VU43 2346 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 HIRAP54198 1017 aaPredicted RBP27.04■■□□□ 1.92
HDAC11-217ENST00000475818 NOGQ13253 232 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 KIF6Q6ZMV9 814 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 TRPM4Q8TD43 1214 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 BCL2L13Q9BXK5 485 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 TMX4Q9H1E5 349 aaPredicted RBP27.04■■□□□ 1.92
HDAC11-217ENST00000475818 ZBTB3Q9H5J0 574 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 PGAP2Q9UHJ9 254 aa27.04■■□□□ 1.92
HDAC11-217ENST00000475818 RRP7AQ9Y3A4 280 aaKnown RBP27.03■■□□□ 1.92
HDAC11-217ENST00000475818 HUNKP57058 714 aa27.02■■□□□ 1.92
HDAC11-217ENST00000475818 DLK2Q6UY11 383 aa27.02■■□□□ 1.92
HDAC11-217ENST00000475818 IBTKQ9P2D0 1353 aaPredicted RBP27.01■■□□□ 1.91
HDAC11-217ENST00000475818 RAD17O75943 681 aa27.01■■□□□ 1.91
HDAC11-217ENST00000475818 CDC37L1Q7L3B6 337 aa27.01■■□□□ 1.91
HDAC11-217ENST00000475818 ATP6V0A2Q9Y487 856 aa27.01■■□□□ 1.91
HDAC11-217ENST00000475818 SHTN1A0MZ66 631 aa27■■□□□ 1.91
HDAC11-217ENST00000475818 NTSR2O95665 410 aa27■■□□□ 1.91
HDAC11-217ENST00000475818 MYL6BP14649 208 aa27■■□□□ 1.91
HDAC11-217ENST00000475818 USP48Q86UV5 1035 aa27■■□□□ 1.91
HDAC11-217ENST00000475818 ZC3H15Q8WU90 426 aaKnown RBP27■■□□□ 1.91
HDAC11-217ENST00000475818 TNRC18O15417 2968 aaPredicted RBP26.99■■□□□ 1.91
HDAC11-217ENST00000475818 TAF7Q15545 349 aaPredicted RBP26.99■■□□□ 1.91
HDAC11-217ENST00000475818 SUPT20HQ8NEM7 779 aa26.99■■□□□ 1.91
HDAC11-217ENST00000475818 VPS33BQ9H267 617 aa26.99■■□□□ 1.91
HDAC11-217ENST00000475818 U2AF1L5P0DN76 240 aaPredicted RBP26.98■■□□□ 1.91
HDAC11-217ENST00000475818 U2AF1Q01081 240 aaKnown RBP eCLIP26.98■■□□□ 1.91
HDAC11-217ENST00000475818 CFAP53Q96M91 514 aa26.98■■□□□ 1.91
HDAC11-217ENST00000475818 LAMB4A4D0S4 1761 aa26.98■■□□□ 1.91
HDAC11-217ENST00000475818 NUP98P52948 1817 aa26.97■■□□□ 1.91
HDAC11-217ENST00000475818 DPP8Q6V1X1 898 aaPredicted RBP26.97■■□□□ 1.91
HDAC11-217ENST00000475818 ZNF34Q8IZ26 560 aa26.97■■□□□ 1.91
HDAC11-217ENST00000475818 NLRP3Q96P20 1036 aa26.97■■□□□ 1.91
HDAC11-217ENST00000475818 ABCC4O15439 1325 aa26.96■■□□□ 1.91
HDAC11-217ENST00000475818 CDHR2Q9BYE9 1310 aa26.96■■□□□ 1.91
HDAC11-217ENST00000475818 TNIP1Q15025 636 aa26.96■■□□□ 1.91
HDAC11-217ENST00000475818 RTFDC1Q9BY42 306 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms