RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 CABP1Q9NZU7 370 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 SERTAD1Q9UHV2 236 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 HCN2Q9UL51 889 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 SPATA31D1Q6ZQQ2 1576 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 CTTNBP2Q8WZ74 1663 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 BACH1O14867 736 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 EFSO43281 561 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 ITGB7P26010 798 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 VAC14Q08AM6 782 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 ABCA8O94911 1581 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 FRMPD1Q5SYB0 1578 aa7.32□□□□□ -1.24
SSR3-204ENST00000467733 APBA3O96018 575 aa7.31□□□□□ -1.24
SSR3-204ENST00000467733 SEMA3FQ13275 785 aa7.31□□□□□ -1.24
SSR3-204ENST00000467733 GPC6Q9Y625 555 aaPredicted RBP7.31□□□□□ -1.24
SSR3-204ENST00000467733 ARHGEF40Q8TER5 1519 aa7.31□□□□□ -1.24
SSR3-204ENST00000467733 DISP3Q9P2K9 1392 aa7.31□□□□□ -1.24
SSR3-204ENST00000467733 ABCA9Q8IUA7 1624 aa7.3□□□□□ -1.24
SSR3-204ENST00000467733 SIN3BO75182 1162 aa7.3□□□□□ -1.24
SSR3-204ENST00000467733 ILDR2Q71H61 639 aa7.3□□□□□ -1.24
SSR3-204ENST00000467733 SYT9Q86SS6 491 aa7.29□□□□□ -1.24
SSR3-204ENST00000467733 NACC1Q96RE7 527 aa7.29□□□□□ -1.24
SSR3-204ENST00000467733 MDFIQ99750 246 aa7.29□□□□□ -1.24
SSR3-204ENST00000467733 USP3Q9Y6I4 520 aa7.29□□□□□ -1.24
SSR3-204ENST00000467733 ADARB2-AS1A8MUL3 147 aa7.28□□□□□ -1.24
SSR3-204ENST00000467733 NEUROD1Q13562 356 aa7.28□□□□□ -1.24
SSR3-204ENST00000467733 RSPO4Q2I0M5 234 aaPredicted RBP7.28□□□□□ -1.24
SSR3-204ENST00000467733 EML3Q32P44 896 aa7.28□□□□□ -1.24
SSR3-204ENST00000467733 PRDM6Q9NQX0 595 aa7.28□□□□□ -1.24
SSR3-204ENST00000467733 STRN4Q9NRL3 753 aa7.28□□□□□ -1.24
SSR3-204ENST00000467733 PHLDB1Q86UU1 1377 aa7.28□□□□□ -1.24
SSR3-204ENST00000467733 LZTS3O60299 673 aaPredicted RBP7.27□□□□□ -1.25
SSR3-204ENST00000467733 ABL2P42684 1182 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 NKAPLQ5M9Q1 402 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 GDPD2Q9HCC8 539 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 SCHIP1Q9P0W5 487 aaPredicted RBP7.27□□□□□ -1.25
SSR3-204ENST00000467733 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 PCDHGA11Q9Y5H2 935 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 NEO1Q92859 1461 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 FER1L4A9Z1Z3 1794 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 RICTORQ6R327 1708 aa7.27□□□□□ -1.25
SSR3-204ENST00000467733 PREX1Q8TCU6 1659 aa7.26□□□□□ -1.25
SSR3-204ENST00000467733 GOLGA3Q08378 1498 aa7.26□□□□□ -1.25
SSR3-204ENST00000467733 RAPGEF2Q9Y4G8 1499 aa7.26□□□□□ -1.25
SSR3-204ENST00000467733 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
SSR3-204ENST00000467733 SUPT5HO00267 1087 aaKnown RBP7.26□□□□□ -1.25
SSR3-204ENST00000467733 TEAD4Q15561 434 aa7.26□□□□□ -1.25
SSR3-204ENST00000467733 NEUROD4Q9HD90 331 aa7.26□□□□□ -1.25
SSR3-204ENST00000467733 TTC37Q6PGP7 1564 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 M0R082 166 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 EML1O00423 815 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 TXLNAP40222 546 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 ZNF417Q8TAU3 575 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 L3MBTL2Q969R5 705 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 ZNF587Q96SQ5 575 aaPredicted RBP7.25□□□□□ -1.25
SSR3-204ENST00000467733 TPSG1Q9NRR2 321 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 PARP3Q9Y6F1 533 aa7.25□□□□□ -1.25
SSR3-204ENST00000467733 SIGLEC1Q9BZZ2 1709 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 DYRK3O43781 588 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 GTF2IP78347 998 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 PSME1Q06323 249 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 TRIM28Q13263 835 aaKnown RBP7.24□□□□□ -1.25
SSR3-204ENST00000467733 LRRC69Q6ZNQ3 347 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 ZDHHC1Q8WTX9 485 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 CFAP74Q9C0B2 1584 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 FANCAO15360 1455 aa7.24□□□□□ -1.25
SSR3-204ENST00000467733 ZMYM4Q5VZL5 1548 aa7.23□□□□□ -1.25
SSR3-204ENST00000467733 NOS2P35228 1153 aa7.23□□□□□ -1.25
SSR3-204ENST00000467733 HSPA2P54652 639 aa7.23□□□□□ -1.25
SSR3-204ENST00000467733 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
SSR3-204ENST00000467733 ZNF232Q9UNY5 417 aa7.23□□□□□ -1.25
SSR3-204ENST00000467733 STRCQ7RTU9 1775 aa7.23□□□□□ -1.25
SSR3-204ENST00000467733 ADH7P40394 386 aa7.22□□□□□ -1.25
SSR3-204ENST00000467733 SLC9A9Q8IVB4 645 aa7.22□□□□□ -1.25
SSR3-204ENST00000467733 RHPN1Q8TCX5 695 aa7.22□□□□□ -1.25
SSR3-204ENST00000467733 ARID4BQ4LE39 1312 aaPredicted RBP7.22□□□□□ -1.25
SSR3-204ENST00000467733 POGZQ7Z3K3 1410 aa7.21□□□□□ -1.25
SSR3-204ENST00000467733 SERTM1A2A2V5 107 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 RAPGEF3O95398 923 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 ALBP02768 609 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 SKIP12755 728 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 EPHA4P54764 986 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 SPEM2Q0P670 501 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
SSR3-204ENST00000467733 MICALL1Q8N3F8 863 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.21□□□□□ -1.26
SSR3-204ENST00000467733 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 ZFP64Q9NPA5 681 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 CHMP3Q9Y3E7 222 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 EFCAB5A4FU69 1503 aa7.21□□□□□ -1.26
SSR3-204ENST00000467733 ATP10BO94823 1461 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
SSR3-204ENST00000467733 C9orf172C9J069 976 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 PIK3CDO00329 1044 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 NID1P14543 1247 aa7.2□□□□□ -1.26
SSR3-204ENST00000467733 SFSWAPQ12872 951 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms