RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
APP-213ENST00000464867 MFSD10Q14728 455 aa13.16□□□□□ -0.3
APP-213ENST00000464867 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
APP-213ENST00000464867 MCOLN1Q9GZU1 580 aa13.15□□□□□ -0.3
APP-213ENST00000464867 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
APP-213ENST00000464867 AFDNP55196 1824 aaKnown RBP13.14□□□□□ -0.31
APP-213ENST00000464867 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
APP-213ENST00000464867 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
APP-213ENST00000464867 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
APP-213ENST00000464867 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
APP-213ENST00000464867 C21orf2O43822 256 aa13.13□□□□□ -0.31
APP-213ENST00000464867 GRM1Q13255 1194 aa13.13□□□□□ -0.31
APP-213ENST00000464867 PRPF38BQ5VTL8 546 aaKnown RBP13.13□□□□□ -0.31
APP-213ENST00000464867 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
APP-213ENST00000464867 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
APP-213ENST00000464867 GPR101Q96P66 508 aaPredicted RBP13.13□□□□□ -0.31
APP-213ENST00000464867 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
APP-213ENST00000464867 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
APP-213ENST00000464867 CA12O43570 354 aa13.12□□□□□ -0.31
APP-213ENST00000464867 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
APP-213ENST00000464867 SERPINB2P05120 415 aa13.12□□□□□ -0.31
APP-213ENST00000464867 CABP4P57796 275 aa13.12□□□□□ -0.31
APP-213ENST00000464867 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
APP-213ENST00000464867 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
APP-213ENST00000464867 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
APP-213ENST00000464867 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
APP-213ENST00000464867 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
APP-213ENST00000464867 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
APP-213ENST00000464867 FYB1O15117 783 aa13.11□□□□□ -0.31
APP-213ENST00000464867 PPM1GO15355 546 aaPredicted RBP13.11□□□□□ -0.31
APP-213ENST00000464867 DGKZQ13574 1117 aa13.11□□□□□ -0.31
APP-213ENST00000464867 NFIXQ14938 502 aa13.11□□□□□ -0.31
APP-213ENST00000464867 RNF166Q96A37 237 aaPredicted RBP13.11□□□□□ -0.31
APP-213ENST00000464867 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
APP-213ENST00000464867 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
APP-213ENST00000464867 PDE6BP35913 854 aa13.1□□□□□ -0.31
APP-213ENST00000464867 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
APP-213ENST00000464867 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
APP-213ENST00000464867 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
APP-213ENST00000464867 EPHX2P34913 555 aa13.09□□□□□ -0.31
APP-213ENST00000464867 MAP2K2P36507 400 aa13.09□□□□□ -0.31
APP-213ENST00000464867 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
APP-213ENST00000464867 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
APP-213ENST00000464867 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
APP-213ENST00000464867 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
APP-213ENST00000464867 PSEN2P49810 448 aa13.08□□□□□ -0.32
APP-213ENST00000464867 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
APP-213ENST00000464867 EYA1Q99502 592 aa13.08□□□□□ -0.32
APP-213ENST00000464867 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
APP-213ENST00000464867 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
APP-213ENST00000464867 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
APP-213ENST00000464867 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
APP-213ENST00000464867 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
APP-213ENST00000464867 DMRTA1Q5VZB9 504 aa13.06□□□□□ -0.32
APP-213ENST00000464867 CNKSR1Q969H4 720 aa13.06□□□□□ -0.32
APP-213ENST00000464867 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
APP-213ENST00000464867 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
APP-213ENST00000464867 KIF20BQ96Q89 1820 aa13.05□□□□□ -0.32
APP-213ENST00000464867 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
APP-213ENST00000464867 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
APP-213ENST00000464867 NPHP1O15259 732 aa13.04□□□□□ -0.32
APP-213ENST00000464867 EVI5O60447 810 aa13.04□□□□□ -0.32
APP-213ENST00000464867 MTHFSP49914 203 aa13.04□□□□□ -0.32
APP-213ENST00000464867 SOX10P56693 466 aa13.04□□□□□ -0.32
APP-213ENST00000464867 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
APP-213ENST00000464867 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
APP-213ENST00000464867 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
APP-213ENST00000464867 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
APP-213ENST00000464867 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
APP-213ENST00000464867 TJP1Q07157 1748 aa13.03□□□□□ -0.32
APP-213ENST00000464867 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
APP-213ENST00000464867 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
APP-213ENST00000464867 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
APP-213ENST00000464867 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
APP-213ENST00000464867 TRPM7Q96QT4 1865 aa13.03□□□□□ -0.32
APP-213ENST00000464867 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
APP-213ENST00000464867 AOC2O75106 756 aa13.02□□□□□ -0.33
APP-213ENST00000464867 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
APP-213ENST00000464867 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
APP-213ENST00000464867 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.33
APP-213ENST00000464867 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
APP-213ENST00000464867 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
APP-213ENST00000464867 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
APP-213ENST00000464867 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
APP-213ENST00000464867 COL15A1P39059 1388 aa13.02□□□□□ -0.33
APP-213ENST00000464867 LTBP1Q14766 1721 aa13.02□□□□□ -0.33
APP-213ENST00000464867 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
APP-213ENST00000464867 FOSBP53539 338 aa13.01□□□□□ -0.33
APP-213ENST00000464867 AMOTQ4VCS5 1084 aa13.01□□□□□ -0.33
APP-213ENST00000464867 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
APP-213ENST00000464867 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
APP-213ENST00000464867 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
APP-213ENST00000464867 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
APP-213ENST00000464867 TLL2Q9Y6L7 1015 aa13.01□□□□□ -0.33
APP-213ENST00000464867 ANKRD26Q9UPS8 1709 aa13.01□□□□□ -0.33
APP-213ENST00000464867 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
APP-213ENST00000464867 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
APP-213ENST00000464867 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
APP-213ENST00000464867 MAP3K9P80192 1104 aa13□□□□□ -0.33
APP-213ENST00000464867 CCDC93Q567U6 631 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms