RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 TSHZ1Q6ZSZ6 1077 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 SLC9A9Q8IVB4 645 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 TRMT44Q8IYL2 757 aaKnown RBP9.71□□□□□ -0.86
LRCH3-210ENST00000461674 ZFRQ96KR1 1074 aaKnown RBP9.71□□□□□ -0.86
LRCH3-210ENST00000461674 RPS6KC1Q96S38 1066 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 KANSL2Q9H9L4 492 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 SCHIP1Q9P0W5 487 aaPredicted RBP9.71□□□□□ -0.86
LRCH3-210ENST00000461674 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 MRVI1Q9Y6F6 885 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 VIL1P09327 827 aaKnown RBP9.7□□□□□ -0.86
LRCH3-210ENST00000461674 SOX9P48436 509 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 MASP1P48740 699 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 ERVK-9P63128 1117 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 EVX2Q03828 476 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 ETFBKMTQ8IXQ9 262 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 FEZ1Q99689 392 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 SRCIN1Q9C0H9 1055 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 ESF1Q9H501 851 aaKnown RBP9.7□□□□□ -0.86
LRCH3-210ENST00000461674 PRDM9Q9NQV7 894 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 TMEM260Q9NX78 707 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 EFR3BQ9Y2G0 817 aa9.7□□□□□ -0.86
LRCH3-210ENST00000461674 COL9A2Q14055 689 aaPredicted RBP9.69□□□□□ -0.86
LRCH3-210ENST00000461674 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
LRCH3-210ENST00000461674 POTEAQ6S8J7 498 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 EVI5LQ96CN4 794 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 PRKAG3Q9UGI9 489 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 TCEAL9Q9UHQ7 104 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 MSRB2Q9Y3D2 182 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
LRCH3-210ENST00000461674 R3HCC1Q9Y3T6 440 aaKnown RBP9.69□□□□□ -0.86
LRCH3-210ENST00000461674 STAU1O95793 577 aaKnown RBP9.68□□□□□ -0.86
LRCH3-210ENST00000461674 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-210ENST00000461674 TBCELQ5QJ74 424 aa9.68□□□□□ -0.86
LRCH3-210ENST00000461674 TEX2Q8IWB9 1127 aa9.68□□□□□ -0.86
LRCH3-210ENST00000461674 LILRB2Q8N423 598 aa9.68□□□□□ -0.86
LRCH3-210ENST00000461674 NOC4LQ9BVI4 516 aaKnown RBP9.68□□□□□ -0.86
LRCH3-210ENST00000461674 OSBPL3Q9H4L5 887 aa9.68□□□□□ -0.86
LRCH3-210ENST00000461674 ETNK1Q9HBU6 452 aa9.68□□□□□ -0.86
LRCH3-210ENST00000461674 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
LRCH3-210ENST00000461674 THRAP3Q9Y2W1 955 aaKnown RBP9.68□□□□□ -0.86
LRCH3-210ENST00000461674 APLP1P51693 650 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 PWP1Q13610 501 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 MTFR1Q15390 333 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 C11orf91Q3C1V1 193 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 PI16Q6UXB8 463 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 C16orf86Q6ZW13 317 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 SPSB2Q99619 263 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 RSRP1Q9BUV0 290 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-210ENST00000461674 TERF2IPQ9NYB0 399 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 CNTN3Q9P232 1028 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 EID1Q9Y6B2 187 aa9.67□□□□□ -0.86
LRCH3-210ENST00000461674 CCDC85CA6NKD9 419 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 POTECB2RU33 542 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 HAX1O00165 279 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
LRCH3-210ENST00000461674 HCLS1P14317 486 aaPredicted RBP9.66□□□□□ -0.86
LRCH3-210ENST00000461674 RAB15P59190 212 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 ZNF511Q8NB15 262 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 CCDC74AQ96AQ1 378 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
LRCH3-210ENST00000461674 DNAJC7Q99615 494 aa9.66□□□□□ -0.86
LRCH3-210ENST00000461674 A6NJY4 79 aa9.65□□□□□ -0.86
LRCH3-210ENST00000461674 IFRD2Q12894 506 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-210ENST00000461674 UBE4AQ14139 1066 aa9.65□□□□□ -0.86
LRCH3-210ENST00000461674 KRT26Q7Z3Y9 468 aa9.65□□□□□ -0.86
LRCH3-210ENST00000461674 TTC16Q8NEE8 873 aa9.65□□□□□ -0.86
LRCH3-210ENST00000461674 BAP1Q92560 729 aa9.65□□□□□ -0.86
LRCH3-210ENST00000461674 KCTD15Q96SI1 283 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-210ENST00000461674 VPS9D1Q9Y2B5 631 aa9.65□□□□□ -0.86
LRCH3-210ENST00000461674 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 SH3BP5O60239 455 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 NOS2P35228 1153 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 EXOSC10Q01780 885 aaKnown RBP9.64□□□□□ -0.87
LRCH3-210ENST00000461674 DGKZQ13574 1117 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 RTN1Q16799 776 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 CCDC24Q8N4L8 307 aa9.64□□□□□ -0.87
LRCH3-210ENST00000461674 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 ERVH48-1M5A8F1 160 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 KIF3BO15066 747 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 IRS1P35568 1242 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 HIRAP54198 1017 aaPredicted RBP9.63□□□□□ -0.87
LRCH3-210ENST00000461674 TNNI3KQ59H18 835 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 INTS6LQ5JSJ4 861 aaKnown RBP9.63□□□□□ -0.87
LRCH3-210ENST00000461674 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 GPR152Q8TDT2 470 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 EPS8L3Q8TE67 593 aaKnown RBP9.63□□□□□ -0.87
LRCH3-210ENST00000461674 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
LRCH3-210ENST00000461674 GGNBP2Q9H3C7 697 aa9.63□□□□□ -0.87
LRCH3-210ENST00000461674 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-210ENST00000461674 PAX3P23760 479 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms