RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 NUP153P49790 1475 aaKnown RBP16.18■□□□□ 0.18
SMTN-213ENST00000460658 ZNF518AQ6AHZ1 1483 aa16.18■□□□□ 0.18
SMTN-213ENST00000460658 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
SMTN-213ENST00000460658 POLR3DP05423 398 aaPredicted RBP16.18■□□□□ 0.18
SMTN-213ENST00000460658 ATL3Q6DD88 541 aa16.18■□□□□ 0.18
SMTN-213ENST00000460658 FAM200AQ8TCP9 573 aa16.18■□□□□ 0.18
SMTN-213ENST00000460658 CNNM2Q9H8M5 875 aa16.18■□□□□ 0.18
SMTN-213ENST00000460658 ORC3Q9UBD5 711 aaPredicted RBP16.17■□□□□ 0.18
SMTN-213ENST00000460658 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
SMTN-213ENST00000460658 BMS1Q14692 1282 aaKnown RBP16.17■□□□□ 0.18
SMTN-213ENST00000460658 SRRTQ9BXP5 876 aaKnown RBP16.17■□□□□ 0.18
SMTN-213ENST00000460658 KRT23Q9C075 422 aa16.17■□□□□ 0.18
SMTN-213ENST00000460658 TCP11L1Q9NUJ3 509 aa16.17■□□□□ 0.18
SMTN-213ENST00000460658 ACEP12821 1306 aa16.17■□□□□ 0.18
SMTN-213ENST00000460658 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
SMTN-213ENST00000460658 TRAF1Q13077 416 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 C8orf34Q49A92 452 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 DZIP1Q86YF9 867 aaKnown RBP16.16■□□□□ 0.18
SMTN-213ENST00000460658 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 STXBP4Q6ZWJ1 553 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
SMTN-213ENST00000460658 CALML4Q96GE6 196 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 TNRQ92752 1358 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
SMTN-213ENST00000460658 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
SMTN-213ENST00000460658 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 MPNDQ8N594 471 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
SMTN-213ENST00000460658 MINDY4BA8MYZ0 360 aa16.15■□□□□ 0.18
SMTN-213ENST00000460658 NLRP5P59047 1200 aa16.15■□□□□ 0.18
SMTN-213ENST00000460658 PDE4BQ07343 736 aa16.15■□□□□ 0.18
SMTN-213ENST00000460658 METAP2P50579 478 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMTN-213ENST00000460658 CETN1Q12798 172 aa16.15■□□□□ 0.18
SMTN-213ENST00000460658 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
SMTN-213ENST00000460658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMTN-213ENST00000460658 ZPR1O75312 459 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 RAB3GAP1Q15042 981 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 CKAP2LQ8IYA6 745 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 CUL5Q93034 780 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 NUP88Q99567 741 aaPredicted RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMTN-213ENST00000460658 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 TEX14Q8IWB6 1497 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 COL17A1Q9UMD9 1497 aaPredicted RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 ENOX2Q16206 610 aaKnown RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 IFI16Q16666 785 aaKnown RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 NBPF7P0C2Y1 421 aaPredicted RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 TAOK3Q9H2K8 898 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 ZSCAN29Q8IWY8 852 aaPredicted RBP16.14■□□□□ 0.17
SMTN-213ENST00000460658 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
SMTN-213ENST00000460658 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
SMTN-213ENST00000460658 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
SMTN-213ENST00000460658 TESK2Q96S53 571 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 BAG3O95817 575 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 GNAQP50148 359 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 TMC6Q7Z403 805 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 SEPT11Q9NVA2 429 aaKnown RBP16.13■□□□□ 0.17
SMTN-213ENST00000460658 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
SMTN-213ENST00000460658 MYZAPP0CAP1 466 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 CKAP4Q07065 602 aaKnown RBP16.13■□□□□ 0.17
SMTN-213ENST00000460658 CCDC91Q7Z6B0 441 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 FLT4P35916 1363 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 TUBBP07437 444 aa16.13■□□□□ 0.17
SMTN-213ENST00000460658 RBM5P52756 815 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMTN-213ENST00000460658 RANBP6O60518 1105 aaKnown RBP16.12■□□□□ 0.17
SMTN-213ENST00000460658 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
SMTN-213ENST00000460658 DDX12PQ92771 950 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 AOX1Q06278 1338 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 WDR62O43379 1518 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
SMTN-213ENST00000460658 F13A1P00488 732 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 GSTO1P78417 241 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 LDHAL6AQ6ZMR3 332 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 CCDC172P0C7W6 258 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 CEP135Q66GS9 1140 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 CENPHQ9H3R5 247 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 ZBTB40Q9NUA8 1239 aa16.12■□□□□ 0.17
SMTN-213ENST00000460658 SKIDA1Q1XH10 827 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 ZKSCAN5Q9Y2L8 839 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 NPHP3Q7Z494 1330 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 MEIS3Q99687 375 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 SYKP43405 635 aa16.11■□□□□ 0.17
SMTN-213ENST00000460658 KIAA0556O60303 1618 aa16.1■□□□□ 0.17
SMTN-213ENST00000460658 GRM8O00222 908 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms