RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
MECP2-206ENST00000460227 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
MECP2-206ENST00000460227 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
MECP2-206ENST00000460227 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
MECP2-206ENST00000460227 FHDC1Q9C0D6 1143 aaPredicted RBP16.32■□□□□ 0.2
MECP2-206ENST00000460227 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
MECP2-206ENST00000460227 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
MECP2-206ENST00000460227 TGFB2P61812 414 aa16.31■□□□□ 0.2
MECP2-206ENST00000460227 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
MECP2-206ENST00000460227 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
MECP2-206ENST00000460227 CCDC24Q8N4L8 307 aa16.31■□□□□ 0.2
MECP2-206ENST00000460227 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
MECP2-206ENST00000460227 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
MECP2-206ENST00000460227 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
MECP2-206ENST00000460227 H7C1W4 665 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
MECP2-206ENST00000460227 GCKRQ14397 625 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 NUTM1Q86Y26 1132 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
MECP2-206ENST00000460227 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
MECP2-206ENST00000460227 LRP5O75197 1615 aa16.3■□□□□ 0.2
MECP2-206ENST00000460227 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
MECP2-206ENST00000460227 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
MECP2-206ENST00000460227 ALDH1L1O75891 902 aa16.29■□□□□ 0.2
MECP2-206ENST00000460227 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
MECP2-206ENST00000460227 ST5P78524 1137 aa16.29■□□□□ 0.2
MECP2-206ENST00000460227 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
MECP2-206ENST00000460227 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
MECP2-206ENST00000460227 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
MECP2-206ENST00000460227 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
MECP2-206ENST00000460227 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
MECP2-206ENST00000460227 TRIM27P14373 513 aa16.28■□□□□ 0.2
MECP2-206ENST00000460227 KCNA3P22001 575 aa16.28■□□□□ 0.2
MECP2-206ENST00000460227 NPHP1O15259 732 aa16.27■□□□□ 0.2
MECP2-206ENST00000460227 PDE6BP35913 854 aa16.27■□□□□ 0.2
MECP2-206ENST00000460227 CASP7P55210 303 aa16.27■□□□□ 0.2
MECP2-206ENST00000460227 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
MECP2-206ENST00000460227 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
MECP2-206ENST00000460227 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.19
MECP2-206ENST00000460227 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
MECP2-206ENST00000460227 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
MECP2-206ENST00000460227 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
MECP2-206ENST00000460227 CCT4P50991 539 aaKnown RBP16.26■□□□□ 0.19
MECP2-206ENST00000460227 INTS3Q68E01 1043 aaKnown RBP16.26■□□□□ 0.19
MECP2-206ENST00000460227 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
MECP2-206ENST00000460227 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
MECP2-206ENST00000460227 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
MECP2-206ENST00000460227 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
MECP2-206ENST00000460227 DPEP1P16444 411 aa16.25■□□□□ 0.19
MECP2-206ENST00000460227 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
MECP2-206ENST00000460227 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
MECP2-206ENST00000460227 ABCC4O15439 1325 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 H0YIN7 160 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 SRGNP10124 158 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 CHRNA5P30532 468 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 CLUAP1Q96AJ1 413 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 NUP98P52948 1817 aa16.24■□□□□ 0.19
MECP2-206ENST00000460227 UTYO14607 1347 aa16.23■□□□□ 0.19
MECP2-206ENST00000460227 CDHR2Q9BYE9 1310 aa16.23■□□□□ 0.19
MECP2-206ENST00000460227 GRM8O00222 908 aa16.23■□□□□ 0.19
MECP2-206ENST00000460227 PLIN1O60240 522 aa16.23■□□□□ 0.19
MECP2-206ENST00000460227 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
MECP2-206ENST00000460227 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
MECP2-206ENST00000460227 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
MECP2-206ENST00000460227 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
MECP2-206ENST00000460227 C9orf78Q9NZ63 289 aaPredicted RBP16.23■□□□□ 0.19
MECP2-206ENST00000460227 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
MECP2-206ENST00000460227 PDE8AO60658 829 aa16.22■□□□□ 0.19
MECP2-206ENST00000460227 RLBP1P12271 317 aa16.22■□□□□ 0.19
MECP2-206ENST00000460227 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
MECP2-206ENST00000460227 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
MECP2-206ENST00000460227 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
MECP2-206ENST00000460227 RIC1Q4ADV7 1423 aa16.21■□□□□ 0.19
MECP2-206ENST00000460227 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
MECP2-206ENST00000460227 MS4A1P11836 297 aa16.21■□□□□ 0.19
MECP2-206ENST00000460227 NPR1P16066 1061 aa16.21■□□□□ 0.19
MECP2-206ENST00000460227 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
MECP2-206ENST00000460227 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
MECP2-206ENST00000460227 TMEM57Q8N5G2 664 aa16.21■□□□□ 0.19
MECP2-206ENST00000460227 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
MECP2-206ENST00000460227 CSF1RP07333 972 aa16.2■□□□□ 0.18
MECP2-206ENST00000460227 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
MECP2-206ENST00000460227 PIM2Q9P1W9 311 aa16.2■□□□□ 0.18
MECP2-206ENST00000460227 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
MECP2-206ENST00000460227 FOXO4P98177 505 aa16.19■□□□□ 0.18
MECP2-206ENST00000460227 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
MECP2-206ENST00000460227 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
MECP2-206ENST00000460227 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
MECP2-206ENST00000460227 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.186e-14■□□□□ 8.7
MECP2-206ENST00000460227 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
MECP2-206ENST00000460227 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
MECP2-206ENST00000460227 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
MECP2-206ENST00000460227 EPHA10Q5JZY3 1008 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms